KEGG   Pseudomyrmex gracilis (graceful twig ant): 109857954
Entry
109857954         CDS       T05003                                 
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X1
  KO
K10858  DNA mismatch repair protein PMS2
Organism
pgc  Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03430  Mismatch repair
pgc03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pgc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    109857954
   03460 Fanconi anemia pathway
    109857954
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pgc03400]
    109857954
DNA repair and recombination proteins [BR:pgc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     109857954
SSDB
Motif
Pfam: MutL_C DNA_mis_repair HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 109857954
NCBI-ProteinID: XP_020290347
Position
Unknown
AA seq 669 aa
MDEPVATTEKSKKIEAISKETIHHICSGQVVLDLAVAIKELVENSLDSGATVIDVKLTDY
GKTCISVSDNGSGILEQDFEGLGLKHHTSKLREFTDLVEVNTFGFRGEALSSLCALSELI
VVTRHPSSDHGFKLEFDRNGVLVKKTPCARDKGTTVHVTNIFKNLPVRAKEFQKNLKKEY
ARAIQVLYSYCLISTNIRITCHNSISGKSPNLVMATRSANNILDNINCVFGKKSVDNIVK
LELQYPDETVLQEYNLPNDVTVDFDWECYVSTCNHTIGRSAPDRQFLYVNGRPCDLTKVS
KLINNIYHRYNNKQYPFVLLNIKLDRQCADVNVTPDKRTIFFTQERLILATLKHSLTTKW
DKLQGNFTTKTLTELNFGLKRTISSNCANPPAKRLQLSSSLSQSDDIQTNIRSVKKPVDV
EMTISISAIKKKLQEKENVIAAPVNREKRIKYRVQMEADQQEIEKELQRELTRDSFGKMK
IIGQFNLGFIIARLEDDLFIIDQHATDEKFRFEKLSNETKLKTQKLIVPKSMNLSALNET
IIIDHRQTFEDNGFTFNINEQAEPGKKIELTEIPVSGNWQFGQEDIEEMVFLIREAGNEI
KESHMYRPSRVRQMLASRACRSAVMIGTALNMSEMQRLIMQMAEMQNPWNCPHGRPTIRH
LLSLLLINK
NT seq 2010 nt   +upstreamnt  +downstreamnt
atggacgagccagttgcaacgacggaaaagtccaaaaaaatagaggctataagtaaagaa
acgatccatcacatttgctcgggccaggtagtgcttgatctcgcagtcgctatcaaagaa
ttggtggaaaacagcttggatagtggtgctacggtgattgacgtgaaactcacagattat
gggaaaacttgcatcagcgtcagtgataatggtagtggtattttagagcaggattttgaa
ggcttaggtttgaaacatcatacttcgaagttacgagagtttacggacttggtggaagtg
aacacattcggatttcgtggcgaggcattgagctcgttgtgcgctttgtccgagctgatt
gttgtcactcgacatccgtcgagcgatcacggatttaaattggaattcgatcggaacggt
gtgcttgtaaagaagacaccgtgcgccagagacaagggtacgaccgtacatgtaacaaac
atattcaagaatctacccgtgagagcaaaagagtttcaaaagaatttgaagaaagagtac
gcgcgcgctattcaggttctgtacagctactgcttaatttccaccaacatcagaattacg
tgtcacaattcgatatcgggcaaatcacccaatctcgtaatggccacaagaagcgccaac
aatatattggacaacataaattgcgtgtttggaaaaaagtccgttgataatattgttaaa
ctcgagttgcaatatccggacgaaacagtattgcaggaatataatttgcccaatgacgtt
accgtggatttcgactgggaatgttacgtgagcacttgtaatcacacgatcggacgttcc
gcccccgatcgacagttcttgtatgtgaacggacgaccgtgcgatctcacgaaagtcagt
aaactgataaacaatatttatcatagatacaacaataaacaatatccgtttgttcttcta
aatatcaagttggatcgacagtgcgccgacgttaacgttactcccgacaagagaacaata
tttttcacgcaagaacgtcttatattggcaacgctcaaacacagtttaacgacgaaatgg
gacaaactgcaagggaacttcacgacgaaaactttaacggaattaaatttcggtttaaaa
agaacaatctcgtctaattgcgcgaatcctccagctaaaagattgcaactatcgtcttcc
ttatcacaaagtgatgatattcagaccaacatcagatcggtaaaaaaacctgttgacgta
gaaatgacgataagtatatcagcaataaaaaaaaaattacaagaaaaagagaacgtaatt
gcggcacctgttaatcgagaaaaaagaataaaatacagagtgcaaatggaagccgatcag
caagagatcgaaaaagaattacaaagagaattaacgagagattcgtttggcaagatgaag
ataataggtcagtttaatcttggtttcataatagctcgtttagaagatgatctttttatc
attgatcaacatgccacggatgaaaaatttcgatttgagaagctcagcaacgaaacaaag
ctgaaaactcaaaagcttatcgtaccgaagtcaatgaacttgtccgcgttgaatgaaaca
ataatcattgatcatcgacaaacgtttgaagataatgggtttaccttcaatatcaacgag
caagctgagcccggcaagaagatagaattaacagaaatacctgtgagcggtaattggcaa
tttggtcaagaggatatagaggaaatggtgtttctcatcagggaagcgggtaacgagatt
aaggaaagtcacatgtatcgcccgagtcgtgtgagacaaatgctggcgtcgagagcgtgt
cgtagcgcggtcatgatcggcacagctttgaacatgagcgagatgcagagactgataatg
caaatggcggaaatgcaaaatccatggaattgtccccatggaagacctaccataaggcat
ctattgtccttattattaataaacaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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