KEGG   Pseudomyrmex gracilis (graceful twig ant): 109859429
Entry
109859429         CDS       T05003                                 
Name
(RefSeq) cleavage stimulation factor subunit 1 isoform X1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
pgc  Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pgc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    109859429
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgc03019]
    109859429
Messenger RNA biogenesis [BR:pgc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     109859429
SSDB
Motif
Pfam: WD40 CSTF1_dimer ANAPC4_WD40 Ge1_WD40 NBCH_WD40 Cytochrom_D1 PROPPIN
Other DBs
NCBI-GeneID: 109859429
NCBI-ProteinID: XP_020293282
Position
Unknown
AA seq 441 aa
MSNNATKEPEVDPKNIIKSRETLYRLMISQLFYDGHQTLAMQLSNVIQAEPPCPPSDRLL
HLMLIGAAHEPDRSKKENTSLSTFASSFDNTLGPGLDLEFETEIQTQAPEPAQYETAYVT
SHKGNCRAGAFSADGQLIATGSVDASIKILDVDRMLAKSAPDEVPPGDQTGGHPVIRTLY
DHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGD
YLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHSNGITSIKYSPDAKTYASAGKDGSIKLWD
GVSNRCINTFVKAHDGYEVCSVTFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTT
GKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRLIVHSPTAP
AFLTCSDDFRARFWFRRMPTH
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgagcaataacgccacgaaggaacccgaagtggatccgaagaatataataaagagcaga
gagactctgtacaggctgatgatcagccagctgttttacgacggtcatcagacactggct
atgcagctgtccaatgttatacaggcggaaccaccgtgtccgccgtcggatcgattgctt
catctcatgctgatcggagccgctcacgagccggatcgttccaagaaggaaaacaccagt
ttgtcaacatttgcgtccagctttgacaacacacttgggcctggattggatttggaattt
gaaaccgaaattcaaacacaagcaccggaacccgcgcagtacgaaaccgcatatgtcaca
tctcacaaaggaaactgtagagccggagcgttttcagctgatggtcagttaatagccact
ggttcggtggacgcgtcaatcaagatcttggacgtggatagaatgctcgctaaatccgcg
cccgacgaagtgccacctggcgatcagacgggaggccatccggttatacgaactttgtat
gatcatttggaagaagtaacgtgtttggaatttcatccaagagaaccgatacttgtatcc
ggtagtcgagacttctccgtaaaactgttcgatttcagtaaagcaagtgttaaaaaagcg
ttcaggactataacggacgccgatcaaattcgttgtctgtcctttcatccaacgggagat
tatctaatagttggaaccaatcatccggtagttagattgtacgacgtgaatacggcacag
tgttttgtgtgcagtatacccagtcatcagcactcgaacggaataacgagcatcaagtat
tcaccggacgcgaagacttacgcgtcggcgggcaaagatggaagtatcaaactttgggac
ggtgtgtccaatcgatgtataaacacctttgtaaaagcgcacgacggttacgaagtgtgc
tcggtaaccttcacaagaaacggcaagtatttactgtcttcggggaaagattccttgata
aaattatgggaattatctaccagcagatgtttaatagcgtacacgggtgctggaactaca
ggaaaacaggaacataaagcacaagctatctttaatcacaccgaggattatgtgatgttt
cctgacgaagccacaacttcgttgtgcgcttggaattctcgcaacgcgtcaagaaagcaa
ttattgtcactgggtcacaacggaccggttagattgattgtacattcaccaacagcaccc
gcgtttctaacgtgtagtgacgatttcagagcaagattttggtttcgcagaatgccgact
cactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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