KEGG   Pluralibacter gergoviae: LG71_04435
Entry
LG71_04435        CDS       T03300                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pge  Pluralibacter gergoviae
Pathway
pge03030  DNA replication
pge03410  Base excision repair
pge03420  Nucleotide excision repair
pge03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pge00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LG71_04435
   03410 Base excision repair
    LG71_04435
   03420 Nucleotide excision repair
    LG71_04435
   03440 Homologous recombination
    LG71_04435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pge03032]
    LG71_04435
   03400 DNA repair and recombination proteins [BR:pge03400]
    LG71_04435
Enzymes [BR:pge01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LG71_04435
DNA replication proteins [BR:pge03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     LG71_04435
DNA repair and recombination proteins [BR:pge03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     LG71_04435
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LG71_04435
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH HHH_5 Prok-E2_E
Other DBs
NCBI-ProteinID: AIQ99203
Position
928296..931082
AA seq 928 aa
MAQIQENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYQPTHAAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT
LAREAEKAGRPVLISTGDKDMAQLVTPGITLINTMTNTILGPEEVVTKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDVLYAEPEKIAGLTFRGAKTMAAKLEQNK
EMAYLSYKLATIKTDVELELTCEQLEVQAPEADALLAMFKQYEFKRWITDVEGGKWLQAK
GGKPAAKPAADAAPVDEEEEAASPLSAENYVTILDEDTLNAWIGKLKQAPVIAFDTETDS
LDNVSANLVGLSFAVEPGHAAYVPVAHDYLDAPDQIPRERVLELLKPLLEDEKCLKVGQN
LKFDRGILANYDIDLRGIAFDTMLESYILDSVAGRHDMDSLSSRWLKHKTITFEEIAGKG
KKQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPKLQQHQGPLNVFNTIEMPLVPVLSRI
ERNGVKIDPAVLHKHSEELAKRLIELEQKAHDIAGEPFNLSSPKQLQTILFEKQGIKPLK
KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH
QAVTATGRLSSTDPNLQNIPVRNDEGRRIRQAFIAPEEYLIVSADYSQIELRIMAHLSQD
KGLLSAFAEGKDIHRATAAEVFSQPLESVTNEQRRSAKAINFGLIYGMSAFGLSRQLNIP
RKESQKYMDLYFERYPGVLAYMERTRAQAKEQGYVETLEGRRLYLPDIKSSNAARRAGAE
RAAINAPMQGTAADIIKRAMIAVDAWLAKAQPRVRMIMQVHDELVFEVHKDDLEAVTTKI
HELMERCVTLDVPLLVEVGSGANWDLAH
NT seq 2787 nt   +upstreamnt  +downstreamnt
atggctcagatccaagaaaaccccctcatcctggtcgatggctcctcttatctctatcgc
gcatatcacgcgttccccccattgaccaacagcgcaggtgagccgactggcgcgatgtac
ggcgtgctgaacatgttgcgtagcctgattatgcaatatcagccgacgcacgctgcggtg
gtatttgatgccaagggcaaaactttccgtgatgaactgtttgaacactacaaatcgcac
cgcccgccgatgccggacgatctgcgcgcgcagattgaaccgctgcatgcaatggtgaag
gcaatggggctgccgctgctggcggtctccggcgtggaggcggatgacgttatcggcacc
ctggcccgcgaagccgaaaaggccggacgtccggtgctgatcagcaccggcgacaaagac
atggctcagctggtgacgcccggcattaccctgattaataccatgaccaacaccatcctc
gggccggaggaagtggtgaccaagtacggcgtaccgccggagctgataatcgacttcctt
gccctgatgggcgactcctcggacaatattcccggcgtaccgggcgtcggcgagaaaacg
gcccaggccctgctgcagggactgggcgggctggacgtgctgtacgccgagcctgagaag
attgccggcctcaccttccgcggcgccaaaaccatggccgcgaagcttgagcagaacaag
gagatggcctatctctcctataagctcgccaccatcaaaaccgacgttgagctagagctg
acctgcgaacagctggaagttcaggcgcccgaggccgacgcgctgctggcgatgtttaaa
cagtacgagtttaagcgctggataaccgacgttgaagggggcaagtggctgcaggcgaag
ggcggcaagccggcggcaaaaccggctgccgatgcggccccggtggacgaagaggaagag
gccgccagcccgctgtcggcggagaattacgtcactattcttgatgaagatacgctgaac
gcctggatcgggaagcttaaacaagcgccggtcattgcctttgacacagaaaccgacagt
ctcgataacgtctccgccaacctggttggcctgtcgtttgccgttgagcccggccacgcc
gcctacgtgccggtggcccacgactacctcgatgcgccggatcagatcccgcgcgagcgg
gtgcttgagctgcttaagccgctgctggaagatgagaagtgcctgaaggtcggccagaac
ctgaagttcgatcgcggcattctcgctaattacgatatcgacctgcgcggcatcgccttt
gacaccatgctggagtcctacatcctcgacagcgttgccggccgccacgatatggacagc
ctctcctcgcgctggcttaagcataaaaccatcaccttcgaagagatcgccggcaagggc
aagaagcagctgacctttaaccagatcgcacttgaagaggcggggcgctacgcggcggaa
gacgccgacgtgacgctccagctgcacctcaaaatgtggccgaagctgcagcagcaccag
gggccgctcaacgtctttaacaccattgaaatgccgctggtgccggtgctttcccgcatc
gagcgcaacggcgtcaaaatcgatccggccgtgctgcacaagcactctgaagagcttgcc
aagcggctgatcgagctggagcagaaggcgcacgacattgccggcgagccgtttaatctc
tcctcgcctaagcagctgcagaccattctgtttgaaaaacagggtattaagccactgaag
aagacgccgggcggcgcgccgtccacctcggaagaggtactcgaagagctggcgctggac
tatccgctgccgaaagtgatcctcgaatatcgcgggctggcgaagctgaaatcgacctac
accgataagctgccgctgatgatcaatccgaaaacggggcgggtgcatacctcttatcac
caggcggtgaccgctaccggccgcctctcctccacggaccctaacctgcagaatatcccg
gtgcgcaacgacgaaggccgccgcattcgccaggcgtttatcgctccggaagagtatctg
atcgtctctgcggactactcgcagatcgagctgcgcatcatggcccacctgtcgcaggac
aagggcctgctgtcggcgtttgccgaaggaaaagacattcaccgcgccacggcggcggag
gtgttcagccagccgctggagagcgtgacgaacgagcagcgccgcagcgccaaggcgatc
aacttcggcctgatctacggcatgagcgcctttggcctctcccggcagctgaacattccg
cgtaaagagtcgcagaagtacatggatctctacttcgaacgctatcccggggtgcttgca
tatatggagcgtacccgggcgcaggcgaaggagcagggctacgttgagactctggaaggc
cgccgcctctatctgccggacatcaaatccagcaacgccgcgcgccgcgccggcgccgag
cgtgcggcaatcaatgccccgatgcaggggactgccgcggacatcatcaagcgggcgatg
atcgccgtcgacgcgtggcttgcgaaggcgcagccgcgggtgcggatgattatgcaggtt
cacgatgaactggtctttgaagtgcacaaagacgatctcgaggccgtaacgacaaaaatc
catgagctgatggagcgctgcgtcacgctggacgtgcctctgctggtggaagtcggcagc
ggcgctaactgggatctggcgcattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (27)   

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