KEGG   Pseudomonas graminis: FX982_00995
Entry
FX982_00995       CDS       T06934                                 
Name
(GenBank) Riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pgg  Pseudomonas graminis
Pathway
pgg00740  Riboflavin metabolism
pgg01100  Metabolic pathways
pgg01110  Biosynthesis of secondary metabolites
pgg01240  Biosynthesis of cofactors
pgg02024  Quorum sensing
Module
pgg_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:pgg00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    FX982_00995
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    FX982_00995
Enzymes [BR:pgg01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     FX982_00995
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     FX982_00995
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: QKF50068
UniProt: A0A6M8MN85
Position
complement(1089737..1090876)
AA seq 379 aa
MTSTEQSVLDAAYMARALELARKGVYSTHPNPRVGCVIVRDGAIVGEGWHVRAGEPHAEV
HALRQAGDKAKDATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPDVAGRGLL
RLMNAGIAVQSGVLESEARALNKGFLKRMEHGLPYVRVKLAMSLDGRTAMASGESQWITG
PEARSAVQRLRAQSSVVLTGADTVLADNARLTVRPDELGLNAELTALAATRPPLRVLVDG
RLRVPLDAPFFKAGNALVVTCAAASARERYHDEGHDMLALPSSGGHVDLRKLLVELAARG
VNDVLVEAGPKLAGAFTRLGLVDEFQIFVAGKFMGSSARPLLDLPLAQMSEALELKIVEM
RAVGNDWRVIAIPASHPGV
NT seq 1140 nt   +upstreamnt  +downstreamnt
atgacctccacagagcaaagcgtgctcgacgcagcctatatggcgcgggcgctggaactg
gcgcgcaagggcgtctactcgacgcaccccaacccgcgtgtcggctgcgtgatcgtgcgt
gatggcgccatcgtcggcgaaggctggcacgtgcgcgccggtgaaccccacgccgaggtg
catgccctgcgccaggcgggcgacaaggccaaggacgcgaccgcttacgtcaccctcgag
ccctgcagtcatcatggccgcacgccgccgtgcgccgacgcgctggtcaacgccggtgtc
gcgcgagtggtcgccgcgatgcaagaccccaatcccgacgttgccggccgtggcctgttg
cgcctgatgaacgctgggatcgcggtgcagagcggcgtactcgaaagcgaagcgcgggcg
ctgaacaaaggtttcctcaagcgtatggaacacggcctgccctacgtgcgggtcaagctg
gcgatgagccttgacggacgcacggccatggccagcggtgaaagccagtggatcaccggc
cccgaagcgcgctccgccgtgcagcgcctgcgtgcgcagtcgagtgtggtgctgaccggc
gccgataccgtgctggccgacaacgcgcggctcactgtccgtcctgacgaattgggcctg
aacgccgaactcaccgccctggccgcgacccgaccgccgttgcgcgtgttggtcgacggg
cgtttgcgggtgccccttgatgcgccgttctttaaagcgggcaatgcgctggtggtgacc
tgtgcggcagcctcggcccgcgagcgttaccacgacgaaggccacgacatgctggcgctg
ccaagtagtggcgggcatgtcgacctgcgcaagttgctggttgaactggcggcccggggc
gtcaatgacgtgctggtcgaagccggtcccaaactggccggcgcgtttacccggctaggc
ctggtggatgaattccagatcttcgtggcgggcaaattcatgggctcgtcggcgcggccg
ttgctggacctgccgctggcgcagatgagcgaggcgctcgaactcaagatcgtcgaaatg
cgagcggtcggcaatgactggcgagtcattgcgatacccgcgtcgcaccccggcgtataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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