KEGG   Panacibacter ginsenosidivorans: FRZ67_12140
Entry
FRZ67_12140       CDS       T06131                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
pgin  Panacibacter ginsenosidivorans
Pathway
pgin00521  Streptomycin biosynthesis
pgin00523  Polyketide sugar unit biosynthesis
pgin00525  Acarbose and validamycin biosynthesis
pgin00541  O-Antigen nucleotide sugar biosynthesis
pgin01055  Biosynthesis of vancomycin group antibiotics
pgin01100  Metabolic pathways
pgin01110  Biosynthesis of secondary metabolites
pgin01250  Biosynthesis of nucleotide sugars
Module
pgin_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:pgin00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    FRZ67_12140 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    FRZ67_12140 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    FRZ67_12140 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    FRZ67_12140 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    FRZ67_12140 (rfbB)
Enzymes [BR:pgin01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     FRZ67_12140 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 NAD_binding_4 3Beta_HSD RmlD_sub_bind
Other DBs
NCBI-ProteinID: QEC68016
UniProt: A0A5B8VBG6
Position
complement(2873009..2874064)
AA seq 351 aa
MQKSILITGGAGFIGSHVVRLFVTKYPEYKIVNLDALTYAGNLENLTDIEHSSNYVFEKV
NILEPEKLKEIFQKHAITDVIHLAAESHVDRSILSPMDFIYTNIIGTVNLLQTAKDFWKD
NLSAHRFHHVSTDEVYGTLGNEGFFTETTAYSPNSPYSASKASSDHFVRAYGETYGIPFV
ITNCSNNYGPNHFPEKLIPLFINNIINNKPLPVYGKGENTRDWLYVIDHARAIDTVFHKA
ANHATYNVGGFNEWKNLDLVKLLIRLMDEKLGRPSGTSEALITYVKDRPGHDLRYAIDAT
KINKELGWSPSVTFEEGLSATIDWYLANTEWLQHVTSGNYQKYYEEQYAVR
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgcagaaaagtatacttataactggaggagcaggatttattggttctcatgtggtaaga
ttatttgtaaccaaatatccggaatataaaatcgtaaatctcgatgcactaacttatgca
ggtaacctggaaaacttaacagatattgagcatagcagtaattatgttttcgaaaaagta
aatattcttgagcctgaaaaattgaaagagatctttcagaaacatgcaataacagatgtt
attcatcttgctgcagaatctcatgttgatcgctccattctttctccaatggattttatt
tataccaacattattggtacagtaaatcttttgcaaacagccaaggatttttggaaagac
aatttatctgctcatcgttttcaccatgtatcaaccgatgaagtgtatggcacgttaggt
aatgaaggcttctttacagaaacaacagcgtattcgccaaactctccatactctgcaagt
aaagcatcatccgatcactttgtaagagcatatggagagacttatggaattccatttgta
attaccaattgcagtaacaattatggccctaatcactttcctgaaaagttgattccttta
ttcatcaacaatatcatcaataataaacccctgcctgtttatggtaaaggtgagaataca
agagactggttgtatgtaatagatcatgcaagagctattgatacggtttttcataaagca
gcaaatcatgctacctataatgttggtggttttaatgaatggaaaaatcttgatcttgtt
aaactgcttatcagactaatggatgaaaaattaggcaggccatcaggcacaagtgaagca
ttgatcacttatgtaaaagacaggcctggccatgatctccgttatgcgatagatgcaaca
aagattaataaagaactgggctggtctccatctgttacatttgaagaaggattaagcgcc
actatagactggtatcttgcaaacacagaatggttgcaacatgttacaagcggtaattac
cagaaatattatgaagaacagtatgcagtaagatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (8)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (26)   

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