KEGG   Panacibacter ginsenosidivorans: FRZ67_13665
Entry
FRZ67_13665       CDS       T06131                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
pgin  Panacibacter ginsenosidivorans
Pathway
pgin03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pgin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    FRZ67_13665 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pgin03400]
    FRZ67_13665 (xth)
Enzymes [BR:pgin01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     FRZ67_13665 (xth)
DNA repair and recombination proteins [BR:pgin03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     FRZ67_13665 (xth)
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: QEC68296
UniProt: A0A5B8VC91
Position
3250836..3251609
AA seq 257 aa
MKIATYNVNSINARLPVLLRWLKEATPDIVCLQELKAIQENFPEQAIKDAGYHAIWHGQK
SWNGVAILSRNNEPQKVRRALPGDDDDTHSRYIEAHVNGLLIACLYLPNGNPAPGPKFDY
KMNWFQRLTTHAAQLLKSGEPVLITGDFNVMPTEKDVYKPERWVDDALFRPEVRAAFKTL
VDQGWTDAIRKLYPDETIYTFWDYFRNAYERNAGLRIDHFLLSPQISNRLIAAGVDRQVR
GWEKTSDHAPVWIELKD
NT seq 774 nt   +upstreamnt  +downstreamnt
atgaaaatagctacctacaatgtaaacagtattaatgcaagattgcctgtactgctacgc
tggcttaaagaagcaacacccgatattgtttgtctgcaggaattaaaagctatacaggaa
aattttcctgagcaggcaataaaagacgctggctaccatgctatctggcacggacaaaaa
agctggaacggtgtggcaattttgtcacgcaacaatgagccacagaaagtccgccgtgcc
ctgcctggtgatgatgatgatacgcatagccgttatatagaagcacatgtaaatggcctc
ctgatagcttgcctgtacctgcccaatggcaaccctgcgccgggcccaaagtttgattat
aaaatgaactggtttcaacgacttaccacacatgcagcacaactgctgaagtcaggtgag
cctgtattgataaccggcgacttcaatgtaatgcctaccgaaaaagatgtgtacaaaccc
gagcgttgggtagatgatgcattgttcaggcctgaggtacgagctgcttttaaaacattg
gtagaccagggttggaccgatgcgatacgcaaactatatcccgatgaaactatttatact
ttttgggattatttccgcaatgcttatgaacgcaatgccggtttacgtatcgatcatttt
ttgttgagcccgcaaatcagcaaccgccttattgcagcgggtgttgaccggcaggtgcgt
ggttgggaaaaaactagcgatcatgctcctgtatggattgagctgaaagattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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