KEGG   Paenibacillus graminis: PGRAT_10905
Entry
PGRAT_10905       CDS       T03325                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pgm  Paenibacillus graminis
Pathway
pgm03030  DNA replication
pgm03410  Base excision repair
pgm03420  Nucleotide excision repair
pgm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pgm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PGRAT_10905
   03410 Base excision repair
    PGRAT_10905
   03420 Nucleotide excision repair
    PGRAT_10905
   03440 Homologous recombination
    PGRAT_10905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pgm03032]
    PGRAT_10905
   03400 DNA repair and recombination proteins [BR:pgm03400]
    PGRAT_10905
Enzymes [BR:pgm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PGRAT_10905
DNA replication proteins [BR:pgm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     PGRAT_10905
DNA repair and recombination proteins [BR:pgm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     PGRAT_10905
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PGRAT_10905
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc HHH_5 HHH_2
Other DBs
NCBI-ProteinID: AIQ68073
UniProt: A0A089M990
Position
2581142..2583814
AA seq 890 aa
MDKLILIDGNNIIYRAFFAMPPLTNTAGQQTNAVYGFTTMLLRLIEEHKPTHMIVAFDAG
KITFRHEGYEDYKGGRQKTPPELSEQFPMLKELLRNLGVPQFEIDGYEADDIIGSISREA
DEAGRQVMIVSGDKDMLQLASEHTTVALVRKGVTEVEMYGPQQIRDKYDLTPQQIIDLKG
LMGDASDNIPGVPGVGEKTALKLLQQFGSVEGVLAGTDELKGKMKEKLEEHADSAIMSKK
LATIYREVPLEHAWEDMVFTGIRSDTAGPALAKLEFKSLLERLSLNAYAPAGGNGEAGNE
TVEAAVLDITIVHEAELPDLIAALPDISALHVESNGENPHRAEVIGIGLSSPERHYFVPF
EVLKSPAAVKLRDWLGDEKAPKSGYDLHRADLALHWQGIAFAGAANDVQLAAYLLDPTEA
NQNLYDLTAKYGLPRLSPDEEVFGKGAKYKIPELEILGNHVARKSATVLGIVQKQQQELT
DTDMTGLFVDLEMPLSRILADMEKQGIAVNKEDLIDLGKEFEAQISKLVADIYAICGTEF
NLNSPKQLGEILFVKLGLPVVKKTKTGYSTDAEVLEKLAPYHDAVRLILQYRTIAKLQST
YVEGLLKEISPDTGKVHTFYRQTIAATGRLSSQFPNLQNIPIRLEEGRKIRKIFVPSEPG
WSILAADYSQIELRVLAHISGDERMKEAFVEDMDIHTKTAMDVFGVSADQVDSNMRRSAK
AVNFGIVYGISDYGLSQNLNISRKEASQFIEQYFEVFKGVRRYMDEIVVEARKQGYVTTL
LERRRYLPEINAKNFNLRSFAERTAMNTPIQGTAADIIKLAMVHMDKALYERGLRSRMLL
QVHDELVFEVPEDELELMKTLLPEVMAGALKLSVPLKAEVSYGSNWYEAK
NT seq 2673 nt   +upstreamnt  +downstreamnt
gtggacaagttgattcttatagatggcaataacattatttaccgcgcattttttgcaatg
ccgccgctgacgaataccgcagggcagcagacgaacgcagtgtatggatttacgactatg
ctgctgcggttaattgaagagcataagcctacccatatgattgttgcgtttgatgcgggg
aagatcacgttccggcatgaggggtatgaagactataaaggcggccgccagaagacgccg
cctgagctctccgaacaattcccgatgctgaaggagctgctgcggaatctgggtgtgccg
cagtttgaaattgacggctacgaagccgatgatatcatcggcagcatctcccgcgaggcg
gacgaggccggacggcaggtcatgatcgtgtccggggacaaggatatgcttcagctggct
tcagagcatactacggtggctttggtgcgcaaaggggttaccgaagtcgaaatgtacgga
ccccagcagatccgtgacaagtatgatctgacaccgcagcagatcattgaccttaaaggt
ctgatgggcgatgccagcgacaatatccccggtgtaccgggcgtaggtgagaaaacagcg
ctgaagctgctgcagcagttcgggtcggtggagggcgtattggccggaacggatgaactg
aaggggaagatgaaggagaagctcgaggagcatgccgacagtgccatcatgagcaagaag
ctggcaacgatttaccgtgaggttccactggaacacgcctgggaggatatggtcttcacc
ggaatccgcagcgatactgccggtccggcgctggctaagctggaattcaaatccttgctg
gaacgcctgtcgctgaacgcgtatgctcctgcaggcgggaacggcgaagctggcaacgaa
accgtggaggctgctgtgctggacatcaccattgtccacgaagcagaactgccggacctg
attgccgctttgccggacatttctgcgctgcatgtcgagtctaacggcgagaatccgcac
cgcgctgaagtgatcggcataggcttgtcctctccagagcggcactacttcgtgccgttt
gaagtacttaagagtcctgcagcggtgaagctgcgggattggctgggagatgagaaggcg
ccgaagagcggctatgatctgcaccgtgcagatctggcgctgcactggcaggggattgct
tttgccggagcggctaatgatgttcaactggctgcatacctgctggacccgacggaagcc
aaccagaatctgtacgaccttacagccaaatatggcctgccccgcttgtctccggatgaa
gaggtgttcggcaaaggcgccaaatataaaatacctgagcttgagattctgggcaatcat
gtcgcccgcaaaagcgccactgtgcttggcatcgtacagaagcagcagcaggagttgacg
gacacggatatgactggcttgttcgttgatctggaaatgccgctgtcgcgcattctggcc
gatatggagaagcagggaattgccgtgaataaagaagatttgatcgacctcggcaaggaa
tttgaggcgcagatttctaagctcgtagcggatatttatgcgatttgcggtaccgagttc
aacctcaactctccgaagcagctgggggaaatcctgtttgtgaagctgggccttccagtg
gtgaagaagaccaaaacaggctattccacggatgccgaggtgctggagaagctggctcct
taccatgatgcagtccggttaattctgcaataccgcaccattgccaaacttcagtcgacc
tacgtggaaggcctgctcaaggaaatttccccggataccgggaaggtgcatacgttctac
cgccagaccattgcggcaaccggacgtctcagcagccagtttccgaatttgcagaatatt
ccgatccggctggaggaaggccgcaaaatccgcaaaatctttgtaccctccgagcccggc
tggtcgattctggcagcggattattcgcagattgaactgcgggtgctggcgcatatttcc
ggcgacgagcggatgaaggaagcttttgtggaggatatggatattcacacaaagactgcg
atggatgtattcggtgtcagcgccgatcaagtggacagcaacatgcgccgttctgccaaa
gcggtcaacttcgggattgtgtacggcatcagtgattacggcctgtcgcagaacctgaat
atttcgcgtaaggaagcttcgcagttcattgagcagtatttcgaagtattcaagggagta
cgccgctatatggatgagattgtggtggaagcacgcaagcagggctatgtcactacattg
ctggagcgccgccggtatttgccggagatcaacgcgaagaactttaacttgcgctctttt
gccgagcggacagccatgaataccccgatccagggaacggcagcggatattattaagctg
gctatggtccacatggacaaggcgctgtatgaacgcggactgagaagccggatgctgctg
caggtgcatgatgagctggtattcgaggtgccggaagatgagctggagctgatgaaaaca
ctgttgccggaggttatggcaggcgctttgaagctttctgtaccgcttaaggcggaggta
agttatggcagcaactggtatgaagcgaaatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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