KEGG   Porphyromonas gingivalis ATCC 33277: PGN_1630
Entry
PGN_1630          CDS       T00714                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
pgn  Porphyromonas gingivalis ATCC 33277
Pathway
pgn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pgn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PGN_1630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pgn03021]
    PGN_1630
   03019 Messenger RNA biogenesis [BR:pgn03019]
    PGN_1630
Transcription machinery [BR:pgn03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     PGN_1630
Messenger RNA biogenesis [BR:pgn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     PGN_1630
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT AT_hook AAA_25 AAA Spore_III_AA AAA_22 OB_RNB Mor Mitofilin
Other DBs
NCBI-ProteinID: BAG34149
UniProt: B2RLA4
Position
complement(1823204..1825180)
AA seq 658 aa
MQKYTIVDLNEKAEAELAAIAGELGIANAGSMPKQELIYKILDEQAISVAGVRKEKQKTT
EDRHTERRKPGRPRKNAEEEAPESKDVAAAPAEPNDEEAQAKRKRGRPRKAAEEIAEETR
EDVQQLVALAAAEETNATEKESAGRKPAAKTSTASPAKAPAKALPRPAETTPRVAPSPPP
TTPVSEPAKDDAKPETPAPPPAIESITTTPAAGAVDEGGARRLVFRHKNSSSVLDQVLPY
SSPQPPQRPKPAGAPVGSSPIRQRQAAGVPTPRREPQQPLYNFDGILECMGVLEIMPDGY
GFLRSSDYNYLSSPDDVYVSQQQIKHNGLKTGDVVAGTIRPPREGEKYFPFVQLRSVNGR
SPEEIRDRVPFDHLTPLFPEEKFTLEAPGIRAVNDKISVRVVDLFAPIGKGQRGLIVSQP
KTGKTMLLKDIANAIAANHPEVYMIVLLIDERPEEVTDMARSVNAEVIASTFDEPAERHV
KIAEIVLNKAKRMVECGHDVVILLDSITRLARAYNTVQPASGKVLSGGVDANALQKPKRF
FGAARNIENGGSLTILATALTDTGSKMDEVIFEEFKGTGNMELQLDRRLSNKRIFPAVDI
MSSSTRRDDLLQDETTLNRMWILRKYLSDMNPVEAMEFVRKQLENTHTNMEFLASMSN
NT seq 1977 nt   +upstreamnt  +downstreamnt
atgcagaagtacacgatcgtcgatttgaacgagaaggctgaagctgaactcgctgctata
gccggcgagctgggtattgccaatgccggctcaatgcccaaacaagaacttatttacaaa
atactcgacgagcaggctatcagtgtagccggcgtccggaaggaaaaacaaaaaacgacg
gaagaccggcacaccgaaaggcgcaagccgggtcgtccgcgcaaaaacgccgaggaggaa
gctcccgaaagcaaagacgtcgcagccgctcctgccgagccgaacgacgaggaagctcag
gccaaacgcaagcgtggccgccctcgcaaagcggcggaagagatagcggaagagacccgg
gaagatgtgcagcagctcgtggctctggctgctgcagaggagacaaatgcaacggagaag
gagagtgccgggcggaagccggcggcgaaaacgtccacagcatcccctgccaaagcccct
gccaaagcccttccccgtccggcagagaccaccccgcgcgtggcaccgtctccccctccc
acgacgcccgtgagcgagccggccaaggacgatgccaagcccgagacgcccgctcctccc
cccgccatcgagtccatcaccacgactcctgctgccggagccgtcgatgagggcggtgct
cgccgcctcgtattcaggcacaagaacagctcctcggtattggatcaggtgctgccgtac
agctctccccagcccccgcagaggcccaaaccggccggtgctccggtcggcagcagcccg
atcaggcagcgacaggcggccggcgtgccgactccccgtcgcgaacctcagcaacctctc
tacaacttcgacggcatcctcgagtgcatgggcgtactggagatcatgcccgacggctac
ggattcctccgctcctcggactacaactatctgtcctctccggacgatgtgtacgtgtcc
cagcagcagatcaagcacaacggactcaagaccggcgacgtcgtggcaggtactatccgt
ccgcccagagagggggagaagtacttccccttcgtgcagctgcggagtgtgaacggtcgc
agccccgaagagatccgcgaccgcgtgcccttcgatcatctcacacccctcttccccgag
gagaagttcaccctcgaagcaccgggcatccgtgccgtaaacgataaaatatccgtccgc
gtcgtagatctcttcgcccccataggcaaaggacagcgcggcctgatcgtatcgcagccc
aagacgggtaagacgatgctcctcaaggacattgccaatgccatcgcagccaatcacccc
gaagtgtacatgatcgtcctgctcatcgacgagcgtcccgaagaggtcaccgacatggcg
cgaagcgtgaacgccgaggtcatcgcttccaccttcgacgagccggcagagcgtcacgtg
aagatcgccgagatcgtcctgaacaaagccaaaagaatggtggagtgcggtcatgacgta
gtcatcctgctcgactccatcacccgtctggcacgtgcatacaataccgtacagcccgca
tcgggcaaggtgctctccggtggtgtcgatgccaatgccctgcagaagccgaaacgcttc
ttcggtgccgctcgcaacatcgaaaacggcggtagtctcaccattctggccacggcgctg
accgacacgggttctaagatggacgaggtgatattcgaagagttcaagggtacgggcaat
atggagctgcagctcgatcgccgcctgtccaacaaacgcatattccccgccgtggacatc
atgtccagcagtacccgtcgcgacgacttgctgcaggacgagaccacgctgaaccgtatg
tggatcctgcgcaagtacctctccgacatgaatcctgtcgaagccatggagtttgtgcgt
aagcagctggagaatacgcataccaatatggagttcctcgcctcgatgagcaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (21)   

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