KEGG T06126: FSB84

Pseudobacter ginsenosidimutans: FSB84_17305

Entry

FSB84_17305       CDS       T06126

Symbol

rluF

Name

(GenBank) 23S rRNA pseudouridine(2604) synthase RluF

K06182

23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]

Organism

pgo Pseudobacter ginsenosidimutans

Brite

KEGG Orthology (KO) [BR:pgo00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pgo03009]
    FSB84_17305 (rluF)
Enzymes [BR:pgo01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.21  23S rRNA pseudouridine2604 synthase
     FSB84_17305 (rluF)
Ribosome biogenesis [BR:pgo03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    FSB84_17305 (rluF)

SSDB

Motif

Pfam:

PseudoU_synth_2 S4 S4_2

Other DBs

NCBI-ProteinID:

QEC43368

Position

complement(4367343..4368389)

AA seq 348 aa
MDNSISLNKFISDTGYCSRREADNLIREGRVMLNDQVAVLGNRFSPGDVVEVDGSLITPD
NKGKRVYLALNKPAGITSTTEENVKGNIISFVGYPKRIFPIGRLDKDSEGLIFLTNDGDI
INKILRAGNSHEKEYIVRLNKAADPHFAQRMSNGLPIMGTTTLPCKVIMINRQTFRIILT
QGLNRQIRRMCEYLGYSVTGLQRVRIMNISLGNLPLGKWRNLSDAEVNMLKEAVSHSTGT
AEKKEKKKQSGRHEQGKTTSNRSGTPHHPKTDRNKPAYKKIILDLKRNTDRKKNLNSRTS
PNSKTGPVIKNRQNPKINQASKTNHSRKTNPVSKKNAVQVTGHKVQEK

NT seq 1047 nt +upstreamnt +downstreamnt
ttggacaactcaatcagtttaaacaaattcatcagcgatacgggctactgttcccgtcgt
gaagcggataacctgatcagggaagggcgggtgatgctcaatgaccaggtagctgtactg
ggcaaccggttcagtccgggcgatgtagtggaagtagatggcagcctgatcactccggat
aacaagggaaaacgcgtttacctcgcattgaacaaacccgccggcattacttccactacg
gaagaaaatgtaaaagggaacatcatttcatttgtaggctatcccaaacgcatcttcccc
atcggaaggctggataaggattcagaaggattgatcttccttaccaatgatggagatatc
atcaataagatcctgcgtgcagggaacagtcacgagaaagaatatatcgttcgtctgaac
aaagcggcagacccgcattttgcacaaagaatgtccaatggcctgccgatcatgggtact
accaccctgccatgcaaggtgatcatgatcaacaggcagacattccggatcatactaacg
caggggcttaaccgccagatcaggcgcatgtgtgagtacctgggttattcggtaacaggg
ctgcagcgtgtaaggatcatgaatatcagcctgggcaacctgccactgggtaaatggcgg
aacctgagcgatgctgaagtgaatatgctgaaggaagctgtatcccactcaacaggaact
gctgagaaaaaggaaaaaaagaaacagtctggcagacatgagcagggaaaaactaccagc
aacagatcaggtactccccaccatccaaaaaccgacaggaacaaacctgcgtataaaaag
ataatcctggatttaaagagaaacacggatcgaaagaaaaatctgaattcaaggacaagc
ccaaattcaaagacagggccggttataaaaaacagacagaatccaaagataaaccaggct
tcaaagacaaaccattctcgaaagacaaacccggtttcaaagaaaaacgcggttcaggtg
acaggtcacaaggttcaggaaaagtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (3)   
   Pfam (3)   
All databases (10)   

Download RDF

DBGET integrated database retrieval system