KEGG   Paraburkholderia graminis: CUJ91_09925
Entry
CUJ91_09925       CDS       T05548                                 
Name
(GenBank) RNA polymerase subunit sigma-24
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
pgp  Paraburkholderia graminis
Brite
KEGG Orthology (KO) [BR:pgp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pgp03021]
    CUJ91_09925
Transcription machinery [BR:pgp03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CUJ91_09925
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 Xre-like-HTH Sigma70_ECF DUF134 HTH_5 HTH_24
Other DBs
NCBI-ProteinID: AXF08207
Position
PHS1_A:complement(2241777..2242307)
AA seq 176 aa
MSFEAEVISWLPQLRRYARALTGDRAWADDLVQDTAERALARWAAFRPNSNLRAWLLTIL
RHLYIDQLRGRREIAVDEESAPWRNLEAPQREVDGLVLRDLQRALYRLPLEQREVLLLVC
VEELTYQETSKALGVPVGTVMSRLSRGREHLRALLEGPAQGPARKPPPLKVVRNPR
NT seq 531 nt   +upstreamnt  +downstreamnt
gtgagcttcgaagcggaagtgatttcgtggctcccgcagttgcgccgctatgcgcgcgcg
ctgacgggggaccgcgcgtgggccgatgaccttgtgcaggacacggccgagcgcgcgctc
gcgcgctgggcggcgttccggccgaacagcaatctgcgcgcgtggctcctgaccatcctg
cggcatctttatatcgatcagctgcgcgggcgccgcgaaatcgccgtcgatgaagaaagc
gccccgtggcgcaatctcgaggcgccgcaacgcgaggtcgacggtctcgtgctgcgcgat
ctgcagcgcgcactgtatcgcctgccgctcgaacagcgcgaggtgctgctgctcgtgtgc
gtcgaggaactgacgtatcaggagacgtcgaaggcgctcggtgtgcccgtcggcacggtg
atgtcgcggctgtcgcgcgggcgcgagcatctgcgcgcgttgctggaggggcccgcgcaa
gggccggcgcgcaagccgccgccgttgaaagtagtgagaaatccgcgatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (15)   

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