KEGG   Paraburkholderia graminis: CUJ91_10655
Entry
CUJ91_10655       CDS       T05548                                 
Name
(GenBank) G/U mismatch-specific DNA glycosylase
  KO
K03649  double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
Organism
pgp  Paraburkholderia graminis
Pathway
pgp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pgp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CUJ91_10655
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pgp03400]
    CUJ91_10655
Enzymes [BR:pgp01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.28  double-stranded uracil-DNA glycosylase
     CUJ91_10655
DNA repair and recombination proteins [BR:pgp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CUJ91_10655
SSDB
Motif
Pfam: UDG GPW_gp25
Other DBs
NCBI-ProteinID: AXF08334
Position
PHS1_A:2410978..2411493
AA seq 171 aa
MAPSLPDVLEPGLSLVFCGINPGVRAATTGHHFEGRNNRFWRAVHLAGFSPQQIRPEDDR
SFLQYGCGLTTAVSRPTARADQLSRAEIEAGAAAFEQKIKRYAPRYIAFLGKMALSAMSG
KRELQWGLQQEPFGGARAWVLPNPSGLNRAYSLELLVRAYRELYVAVASSD
NT seq 516 nt   +upstreamnt  +downstreamnt
ttggccccttctcttccggatgttctcgagccgggtttgtcgctggtcttttgcggtatc
aatcctggcgtgcgtgcggcaacgaccggccatcatttcgagggcagaaacaaccggttc
tggcgtgccgttcatctcgcgggtttttctccgcaacagattcggcctgaagacgaccgc
agcttccttcagtatggatgcggtctcactacagcagtatcgcgcccaaccgcacgcgcc
gaccagctatcgcgagcggaaatcgaagcaggcgcggctgcgttcgagcaaaagatcaaa
cgctatgcgccacgctacattgcctttctcgggaagatggcgctatccgctatgtccggc
aaacgcgagcttcaatggggacttcagcaagaacctttcggtggtgcgcgtgcgtgggtg
ctgccaaatccgagtggcctgaatcgtgcctatagcctcgaattactcgtgcgtgcttac
cgcgaactttacgtcgccgttgcgtcttcggattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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