KEGG T05548: CUJ91

Paraburkholderia graminis: CUJ91_26765

Entry

CUJ91_26765       CDS       T05548

Name

(GenBank) HU family DNA-binding protein

K03530

DNA-binding protein HU-beta

Organism

pgp Paraburkholderia graminis

Brite

KEGG Orthology (KO) [BR:pgp00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pgp03032]
    CUJ91_26765
   03036 Chromosome and associated proteins [BR:pgp03036]
    CUJ91_26765
   03400 DNA repair and recombination proteins [BR:pgp03400]
    CUJ91_26765
DNA replication proteins [BR:pgp03032]
Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    CUJ91_26765
Chromosome and associated proteins [BR:pgp03036]
Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    CUJ91_26765
DNA repair and recombination proteins [BR:pgp03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      CUJ91_26765

SSDB

Motif

Pfam:

Bac_DNA_binding HU-HIG

Other DBs

NCBI-ProteinID:

AXF11451

Position

PHS1_B:complement(1938242..1938520)

AA seq 92 aa
MNKQELIDAVAAATGESKAATGQTIDAIVEAVTKAVVGGDTVQLVGFGSFSTGARAARVG
RNPSTGAEIQIAAAKTVKFTAGKAFKEAVNAS

NT seq 279 nt +upstreamnt +downstreamnt
atgaacaaacaggaactgattgatgcagtcgccgcagcgacgggcgaaagcaaagcggcc
acgggccaaaccatcgacgctatcgttgaagcggtgaccaaagccgtggtcggtggcgat
acggtgcaactggtcggtttcggttctttctcgactggcgcgcgtgcagcacgcgtgggc
cgcaatccgtcgacgggcgccgagatccagatcgccgcagccaagacggtgaagttcacc
gcaggcaaggcgttcaaggaagcagtcaacgcgtcgtaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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