KEGG   Planococcus glaciei: FK545_04105
Entry
FK545_04105       CDS       T06125                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
pgq  Planococcus glaciei
Pathway
pgq03420  Nucleotide excision repair
pgq03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pgq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    FK545_04105
   03430 Mismatch repair
    FK545_04105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pgq03400]
    FK545_04105
Enzymes [BR:pgq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FK545_04105
DNA repair and recombination proteins [BR:pgq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FK545_04105
   MMR (mismatch excision repair)
    Other MMR factors
     FK545_04105
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_12 AAA_30 ResIII SNF2-rel_dom
Other DBs
NCBI-ProteinID: QDY44980
Position
complement(838340..840466)
AA seq 708 aa
MSNFFERKQKQLGVELNKIQRKAVERTEGPLLLLACPGSGKTTTMIMRVGYLIEEKKVQP
HRIKAITFSKASAIDMQERYKRFFPKLAPVDFSTIHSLAFQITREYFAESRYVMIEGSES
HGLHKKRLLREMFETEVGEPITDDQLDELTSFISFVKNKMTPREQWNKLEAPFEGAIEIL
KTYEAFKENYDVRLVDFDDMLSLANEALEKDADLLAKYQNRWDYVMTDESQDTSMIQHAI
VEKLVARHNNLCVVADDDQSIYTWRAAEPTYLLKFKNVYPDAYVMKMERNYRSSKNIVEA
ANLFIKTNKKRHDKNMFTKQPEGDPIVIRRLASEEAQLKYVMKELKELKHFGDVAILYRN
NSSSTLLMSELDRLGIPFYMKDADNRFFSHWIVEDMLNFMRFSLKPERIDIYAKIASKTN
AYWSGSQLKQLSRMKPTAKNTFGEINLNITLKDYQLKILAEQKKWFDALNGMKPLKVIRT
IRADLGYDQMLASRAEKFGMRLQYLEQILITLEQIAEPLSSMTEFAKRLKELEQVTQNAK
AEKTEDMLTLSTFHSSKGLEFERVYMIDLVEGIIPTEEDAENPDTLEEARRLFYVGMTRA
KKHLELISYDSESRFVDEVRDIVVPEKPVAPKTRTVVKTPIKVDVPDNPNAAQREDELLE
GAKVRHRVFGTGKIIERDHERISIQFAKERKELLIDICLSYKLLEVLD
NT seq 2127 nt   +upstreamnt  +downstreamnt
atgagcaatttttttgaacgcaagcaaaaacaactcggagtggaactgaacaaaattcaa
cgcaaagctgtggagcggacagaagggccgctgctcttattggcgtgtcccggatcgggc
aaaacaaccacgatgattatgcgagtcggatatttgattgaagagaaaaaagtgcagccg
catcgcataaaagccatcacgttcagcaaggcatctgccatcgatatgcaggaacgctat
aaacgttttttcccgaagcttgcaccggttgatttttccacgatccatagcctggctttc
cagatcacgcgggagtactttgcggaatcccgttacgtaatgatcgaaggcagcgaatcg
catggccttcacaaaaagcggctgctgcgtgaaatgttcgaaacggaagtcggggaaccg
atcaccgacgatcagttggatgaattgacgtcgttcatcagttttgtgaaaaacaaaatg
acgccaagagagcaatggaacaagttagaggcgccttttgaaggggctattgagatctta
aagacgtacgaggcatttaaagagaactacgatgtccgattggtggatttcgatgacatg
ctttccctcgcgaacgaagcgctggagaaagatgcggatctgcttgcgaaataccagaat
cgctgggattatgtcatgaccgatgaaagccaggatacttcgatgatccagcatgccatc
gtggaaaaactggtggcccgccacaacaacctttgcgtggttgcagatgatgaccagtcg
atttatacatggcgtgcggcagaaccgacgtatttgctgaagtttaaaaatgtgtatccg
gacgcctatgtgatgaaaatggagcgcaattaccgctcctccaaaaacattgtagaggcc
gcaaatttattcatcaaaacgaacaaaaagcggcacgacaaaaacatgttcaccaagcag
cctgaaggagatccaattgtcatccggcgcctcgcttctgaggaagcgcagttgaagtat
gtgatgaaggaactgaaagaactgaagcattttggcgatgtggctatcctttaccgcaat
aattcctcttcgacgcttttgatgagtgaactggaccgtctgggcataccattttatatg
aaagatgcggacaaccgtttcttctcgcactggattgtggaggatatgctgaattttatg
cgcttcagcttgaagccggaacgcatcgacatttacgcgaaaatcgcttcaaaaacaaat
gcctactggtcgggaagccaattgaagcagttgagccgcatgaagccgactgcaaaaaat
acgttcggtgaaatcaatttgaacattacgctgaaggactaccaacttaaaattcttgcc
gagcagaaaaaatggtttgatgcattgaatggcatgaagcccctaaaagtgattcggaca
atccgggcggatctgggatacgatcaaatgcttgcaagccgcgcggaaaagttcggcatg
cgcctgcagtatttggaacagatcttgattacgctggaacaaatcgccgaaccgctttca
agcatgactgaatttgcgaaaaggctgaaggaattggagcaagtcacccaaaatgcaaaa
gccgaaaaaaccgaggacatgctgactttatccactttccacagttccaaaggcttggaa
tttgaacgggtgtatatgattgatctggtggaaggcatcatcccgaccgaggaagatgca
gaaaacccggacaccttggaagaagcacggcggctattttacgtcggcatgacgcgtgcc
aaaaagcatctggaactgatcagctatgacagcgagtcccgctttgtggatgaagtgcga
gatattgtggtgccggagaagccggtagccccaaaaacacggacggtcgttaaaacgccg
attaaagtagatgttcccgataatccgaatgccgctcagagagaagatgaacttttggaa
ggggcaaaagttcgccaccgtgtttttggcacgggcaaaatcattgaacgggatcatgag
cgcatctcgatccaatttgcaaaagagcgaaaagaattgctgattgatatttgtttgagc
tataagttattggaagtactggattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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