KEGG   Puccinia graminis: PGTG_00006
Entry
PGTG_00006        CDS       T02226                                 
Name
(RefSeq) hypothetical protein
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
pgr  Puccinia graminis
Pathway
pgr03020  RNA polymerase
pgr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pgr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PGTG_00006
  09124 Replication and repair
   03420 Nucleotide excision repair
    PGTG_00006
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pgr03021]
    PGTG_00006
   03400 DNA repair and recombination proteins [BR:pgr03400]
    PGTG_00006
Transcription machinery [BR:pgr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     PGTG_00006
DNA repair and recombination proteins [BR:pgr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PGTG_00006
SSDB
Motif
Pfam: RNA_pol_L RNA_pol_A_bac
Other DBs
NCBI-GeneID: 10528083
NCBI-ProteinID: XP_003307056
UniProt: E3JPW7
AA seq 365 aa
MSTAPLPLEPTQSTDGSQLQVKVTELDDQHAAFILEGIELGLANSLRRTMIADLTTIAIH
SVEFEENTSVLPDEMIAHRLGLIPLISEDLDKYLKNWQRDCTCLSYCDDCSIELVLSTKC
TLVGDVLAVNSHDLVITPREDGAHRGDVGKPYQFTMPGGEQPGVLITKLRKGQEVRLKCR
AIKGIGQEHAKWSPVSTIGFEYDPYNRLGHTDLWFEVGTDPKAEWPLTKNAKYERPPLDD
EPVDYTSKPSRFYFDVESAGSLKPDDIVIKGIESLIVKLASVQQGIQAALGEGGGLNPDG
RNTPYMGTPFGGAGGATPGSRPDGTYSTYGGATPNARNFSDWGPPAAPLNPPGGPSTNGY
SGGWE
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgtccaccgcacccttaccactagaaccaacccagtcgaccgacggatcacaactacag
gtcaaagtcaccgagctggacgaccagcatgcggcattcatcctagaaggcatcgaacta
ggactggcaaactcgttaagacggacgatgatcgcagatctgacgacgatcgccatccat
tcggtcgagttcgaagagaatacgagcgtgttgcctgatgaaatgattgcgcatcggctc
ggattaatccccctgatcagtgaggatcttgataaatacctcaaaaattggcaacgggat
tgtacttgtttatcgtattgtgacgactgttcgatcgaattagtcctttcaactaaatgc
accttggtcggtgatgttctggcagtcaattcgcacgaccttgtcatcacgcccagggag
gatggggcacatcgaggtgatgtgggtaaaccataccaattcactatgcctggtggtgaa
caaccaggagtcttgattaccaaacttcgcaagggccaagaagtccgtttaaaatgccga
gccatcaagggaattggtcaggaacatgccaaatggtcacctgtatcgactattgggttt
gagtacgatccatacaatcgccttgggcatactgatctatggttcgaagtcggcaccgac
ccaaaagccgaatggcctctcacgaaaaacgccaaatatgagcgacctccgctagatgac
gaaccagtggattacactagtaaaccctcgcggttctatttcgatgttgaatctgcggga
agccttaaacctgacgacatcgtcatcaaaggaatcgaatctctgattgtcaaactggca
tctgtccaacagggcatccaagccgcattaggtgaaggtggtggtctcaatccagatggc
cggaacactccatacatgggcacaccctttggaggagcgggtggtgctactccaggctct
cggcccgatggcacgtattccacctacggaggcgccacgccaaacgcgcgaaatttctcc
gactggggtcctcccgctgcaccactcaatcctcccggtggtcctagtactaatggttat
tctggcggttgggaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (29)   

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