KEGG   Pedobacter ginsengisoli: CPT03_08190
Entry
CPT03_08190       CDS       T05145                                 
Name
(GenBank) efflux transporter periplasmic adaptor subunit
  KO
K03585  membrane fusion protein, multidrug efflux system
Organism
pgs  Pedobacter ginsengisoli
Pathway
pgs01501  beta-Lactam resistance
pgs01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:pgs00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    CPT03_08190
   01503 Cationic antimicrobial peptide (CAMP) resistance
    CPT03_08190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pgs03036]
    CPT03_08190
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pgs02000]
    CPT03_08190
   01504 Antimicrobial resistance genes [BR:pgs01504]
    CPT03_08190
Chromosome and associated proteins [BR:pgs03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Divisome proteins
    CPT03_08190
Transporters [BR:pgs02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   CPT03_08190
Antimicrobial resistance genes [BR:pgs01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    CPT03_08190
SSDB
Motif
Pfam: HlyD_D23 Biotin_lipoyl_2 HlyD_3 Biotin_lipoyl
Other DBs
NCBI-ProteinID: ATP56455
UniProt: A0A2D1U4E1
Position
complement(1993014..1994138)
AA seq 374 aa
MKSILIFSAMFLLACSNKTPQAAAPAPPALPVASVVSGTETTFQEYPASIEGSVNVEVRP
QVSGTLEKVYVDEGAYVKAGQPIFKINDQPYRASLNNALAAQHSAEASLINAQLEVERLT
SLVQNKVISDFQLKSAKATALVAKANIEQAKANVSTASINLGYTLIKAPVSGYIGRLIKK
QGSLVAPVDAEALTQLSDVHDVHVYFALGEKDFVNFKDQYPGQTLSDKLKQLPAVSLILA
DDTEYGTKGRVDVIDGQFDKNTGAITVRAKFANPLGLLRSGNTGRIRLSLQHNNTLVVPQ
SATIEVQDKIFVYALADSNKVKKQAINVIGKTGTNYLVKDGVKAGDQIVLSGLDRLQEGA
VIAPQKATDKVAKN
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgaaatcaatacttatattttccgccatgtttttattggcttgttccaataaaacccct
caggctgcagcacctgcaccgcctgccttacctgttgccagcgttgtttctggtacagaa
actacatttcaagagtaccctgcatctatcgaaggttctgtaaatgttgaagttagacca
caagttagtggtaccttagaaaaagtatatgttgatgaaggggcttatgtaaaagccgga
cagcctatatttaaaataaacgatcaaccatacagggcttcattaaacaatgcccttgca
gctcagcattcagccgaggcaagtttaataaacgcccagttagaggttgaacgcttaaca
tctctggtacagaacaaagtaatctcagattttcaattaaaatctgctaaagctactgcg
cttgttgccaaagcaaatattgaacaagctaaagcaaatgtttcaactgcatcaataaac
ttaggttataccttaattaaagccccggttagcggttacattggcaggttaattaaaaaa
cagggaagccttgttgcacctgttgatgctgaggcgcttacccaattatctgatgtacac
gatgtacacgtatattttgcacttggcgaaaaggattttgtgaattttaaagatcaatat
ccaggtcaaaccttaagcgataaacttaaacagcttcctgcagtttcattgattttagct
gatgataccgaatacggtaccaaaggaagagttgatgttattgatggccagtttgataaa
aatacaggtgcaattactgttagggcaaaatttgctaacccactgggcttattaagatct
ggcaatacaggtagaatccgtttgagtttgcaacacaacaacacgcttgtagttcctcag
tcggcaactattgaagtgcaggacaaaatatttgtttatgcccttgccgacagcaataaa
gttaaaaaacaagcgattaacgttattggcaaaacaggtaccaactatctggtaaaagat
ggtgttaaagccggtgatcagattgtgttaagcgggttagaccgcctgcaggaaggtgca
gtgattgcaccacagaaagcaacagataaagttgctaaaaactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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