KEGG   Pedobacter ginsengisoli: CPT03_08970
Entry
CPT03_08970       CDS       T05145                                 
Name
(GenBank) DNA topoisomerase III
  KO
K03169  DNA topoisomerase III [EC:5.6.2.1]
Organism
pgs  Pedobacter ginsengisoli
Brite
KEGG Orthology (KO) [BR:pgs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pgs03032]
    CPT03_08970
Enzymes [BR:pgs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     CPT03_08970
DNA replication proteins [BR:pgs03032]
 Prokaryotic type
  DNA Topoisomerases
   CPT03_08970
SSDB
Motif
Pfam: Topoisom_bac Toprim
Other DBs
NCBI-ProteinID: ATP56595
UniProt: A0A2D1U4R7
Position
complement(2168042..2169901)
AA seq 619 aa
MKIVIAEKPSVARELAKVFGATAKKDGYIEGKGYSFTWAFGHLLQLAPPQEYGFIGWRRQ
HLPMLPKKFKLGIRKIKTKDGLVEDPGVRKQLDIIKKLFDEATEIIVATDAGREGELIFR
YIYYFLKCKKPFKRLWISSQTDEAIKEGFRNLKPGTDYDTLFNSAHCRSESDWLVGMNAT
QALSISAGARSVLSLGRVQTPTLAMICSRFLEIKNFVPQLYYQLAIQLDKDGQLFKAISV
NNFDKKEEAEELFAKIKDTTSGFSNGGKILTVEAKPRKEPPPLLHDLSSLQQEANKRKGF
TADQTLNLLQGLYESKLVTYPRTGSRYIGDDVYANVPNLIDKLKVHKDFGKQAEFLLTVP
LNKRSVNAKKVTDHHAILPTGESPYQLSGDKQAIYDMVVGRMLEAFHQECVKEITKITIE
SGSVFMANGTVIRSAGWRSVFNESDDDKKDEENPSLPKVKVGEELPVVNKALLEKQTKPK
PLYNEASLLKALETSGKDIEDEELRYAMKDSGLGTPATRAAIIETLINRDYIVREKRNLV
PTTKGLAVYDVVKDQKIAQAELTGQWEKRLEEIRSGASVADFKAEITDYTRTITNELLQS
GTGLAEKFAKEEKPVEKVS
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgaagattgttattgcagaaaagccttcagtggcgcgtgagttggctaaagtcttcggt
gctacagcaaaaaaagatggttatatagagggtaagggatattcttttacatgggcattt
ggacatttgcttcaattggctccaccacaagagtatggatttataggatggagaaggcaa
cacttaccgatgctgcctaaaaaatttaagttagggattaggaaaataaaaactaaggat
ggcttagttgaagatcctggtgttagaaaacagctcgatatcattaaaaaattgtttgat
gaggctactgagataattgtagcaacggatgctgggcgggaaggtgaacttattttccgc
tacatttactattttttgaaatgcaaaaaaccttttaaaaggctatggatttcgtcgcaa
actgatgaggcaataaaggaaggctttagaaatctgaaaccaggaacagattatgatacg
ctttttaattcggcacattgtagatctgaatcggactggttggtggggatgaatgcaaca
caggcgcttagtatatcggctggtgcgcgatcggtcctttcattaggacgggttcaaaca
cctactttggcaatgatttgttcgcgttttctggaaattaagaactttgtgcctcaatta
tattatcagcttgcaatacagttagataaggatggtcaactgtttaaagcaatatctgta
aataactttgacaaaaaagaagaagcagaagaattgtttgcaaaaattaaagatactaca
tctggtttttcaaatggtggtaaaattttaaccgttgaagcaaaaccaagaaaggaacca
ccacctttattgcatgatttgagtagcttgcaacaagaagctaataaacgtaagggattt
actgccgaccagactttaaatttgttacaaggcttatatgaaagtaaattggttacttat
ccgcgtacaggtagcagatacattggcgatgatgtgtacgcgaatgttccaaacctaata
gataagttgaaggtacataaggattttggaaagcaggctgaatttctgctaacagtgcca
ttaaataagagaagcgtaaatgccaagaaggtaaccgatcaccatgcaattttacctaca
ggcgagtctccttatcagttaagcggtgataagcaagcaatttatgacatggtagtggga
aggatgcttgaagcttttcatcaggaatgtgtaaaggaaatcacaaagataacaattgaa
tcaggctcagtttttatggcaaatggaacggtaattcgttctgcaggatggagatctgta
tttaatgaatcagatgatgataagaaggatgaagaaaatccatctttaccgaaggtaaag
gtaggcgaggagcttccggttgtaaataaagctttgttagaaaaacaaactaagcctaaa
cctttgtataacgaggcatctttattaaaggcacttgaaacctctggaaaagatatagaa
gatgaagagttgaggtatgcaatgaaagacagtggattaggtacacctgctaccagggca
gcaattattgaaactttgattaacagagattacattgtaagggaaaaaaggaatttagtg
cctactactaaaggtttggcggtttatgacgtggtaaaggatcagaaaattgcgcaggca
gagcttactggacaatgggaaaaaaggctggaagaaattcgctcaggagcctctgttgcc
gattttaaagctgagattactgactataccagaaccattactaatgagttattacaatcg
ggaacgggattggcagagaagtttgcaaaggaggagaaacctgttgagaaagtaagttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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