KEGG   Pedobacter ginsengisoli: CPT03_16120
Entry
CPT03_16120       CDS       T05145                                 
Symbol
rsgA
Name
(GenBank) ribosome small subunit-dependent GTPase A
  KO
K06949  ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
Organism
pgs  Pedobacter ginsengisoli
Pathway
pgs00730  Thiamine metabolism
pgs01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pgs00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    CPT03_16120 (rsgA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pgs03009]
    CPT03_16120 (rsgA)
Enzymes [BR:pgs01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.100  thiamine phosphate phosphatase
     CPT03_16120 (rsgA)
Ribosome biogenesis [BR:pgs03009]
 Prokaryotic type
  GTPases
   CPT03_16120 (rsgA)
SSDB
Motif
Pfam: RsgA_GTPase RsgA_N MMR_HSR1 AAA_29 FeoB_N AAA_16 ABC_tran eIF-1a Septin nSTAND1 AAA_23 AAA_7 DUF842 MMR_HSR1_Xtn
Other DBs
NCBI-ProteinID: ATP57872
UniProt: A0A2D1U8J8
Position
3922278..3923198
AA seq 306 aa
MRGLVIKSTGSWYQVHAEDGIDYDCRIKGKFRIQGIQTTNPIAVGDHVEFELEPNSDNGI
INKLHDRKNYIIRKSINLSKQAQIIAANMDQAFLVVTLASPRTSLGFIDRFLATAEAYSI
PAVLIFNKLDLFNEDGLAILAEYAAIYENIGYPCYTVSAIEGTNISQIESLLKDKTTLFS
GHSGVGKSSLINALLPGRSIKTGEISEASDKGQHTTTFAEMHTLPFGGYLIDTPGIRELG
IFDIRPEELGHYFREMRDLMHECKFNNCRHVNEPGCAVIKAVENGEIELSRYESYLSIYN
GNETRA
NT seq 921 nt   +upstreamnt  +downstreamnt
atgcgaggattagtaattaaatcaacaggaagctggtatcaggttcatgcagaagatggc
atcgactacgactgccggattaagggcaagtttagaattcagggtattcaaaccacaaat
cccattgcggttggagatcatgtagagtttgagcttgagccaaactccgacaatggaatc
atcaataaactgcatgaccggaaaaattatattatccgcaaatcgatcaatttatccaag
caggcgcaaattattgcagccaatatggatcaggcttttttggtggttacacttgcctct
ccccgtacttcgttaggctttattgatcgctttttggcaactgccgaagcatactctatt
cctgcagttctgatttttaataagctagacctttttaatgaggatggcctggctatttta
gctgagtatgcagccatttatgaaaacatcggttatccctgctatacagtatcggccata
gagggaaccaatatctctcagatagaaagcttacttaaagataaaactaccttgttttcc
ggccattcgggtgttggaaaatcaagtcttattaatgcactgttacccggaagaagtatt
aaaacaggtgaaatctcagaggccagcgacaaaggtcagcatactacaacctttgcagaa
atgcatactttgccgttcggaggctacttgatagatactccgggtataagggaactaggg
atattcgacatcaggcctgaagagcttggtcattatttcagagagatgagggatttgatg
catgaatgtaagtttaacaactgccgacatgttaatgaacccggctgcgcggttataaaa
gcggtagaaaatggcgaaatagaactaagcaggtacgaaagctaccttagtatttataat
ggtaacgaaacaagggcttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (32)   

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