KEGG   Pedobacter ginsengisoli: CPT03_18300
Entry
CPT03_18300       CDS       T05145                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K07713  two-component system, NtrC family, response regulator HydG
Organism
pgs  Pedobacter ginsengisoli
Pathway
pgs02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pgs00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CPT03_18300
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pgs02022]
    CPT03_18300
Two-component system [BR:pgs02022]
 NtrC family
  HydH-HydG (metal tolerance)
   CPT03_18300
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA Mg_chelatase AAA_2 AAA_22 RsgA_GTPase HTH_30 AAA_3 bpMoxR Xre-like-HTH APS_kinase AmiR_N AAA_16 PG_isomerase_N HTH_17
Other DBs
NCBI-ProteinID: ATP58274
UniProt: A0A2D1U9S7
Position
complement(4405941..4407341)
AA seq 466 aa
MRKILIVDDEVNIGVLLSKFLTRNSFSVSTATSGVTAMDYLAKEAYDLVLCDYRLEDTDG
REMLIKIKESYPSTGVIIITGYSDIKLAVELIKLGAYDYITKPLYPDEILNTINKAIETQ
IALNVNQSETSSEAPKQKTAKQVYQQVDNFVTGQSPASKELMKQIQLVAPTSYSVILTGE
SGTGKESVAKAIHLNSPRKDRPFVAMDCGSLTKELAGSEFFGHEKGSFTGALYTKIGHFE
MANGGTLFLDEVGNLSYDIQAALLRTVQERKIKRIGSTKEIDLDVRIIVATNENLGNAIQ
KGKFREDLYHRFNEFSIGLPPLSQRGDDIMVFAYTFLDVANQELSRNVQGFSEEVVDCFL
TYNWPGNVRELKNVVRRATLLTESQEIQLKALPLEISTYAKASAIESSISRIEKPRDLKN
AALEAEYDAILKVLREVNFNKTKAAKILNIDRKTLYNKMRAINLDT
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgagaaaaatattaattgtcgacgatgaggtaaacatcggtgtgctgttgtccaaattt
ttaacccgaaattcatttagtgtatcaacggctacaagtggtgtgacagcaatggattac
ctcgctaaagaagcttatgaccttgttttatgtgattataggctagaagatacagacggg
agagagatgctgatcaagataaaggaaagttatcccagtaccggggttattattattacc
ggctattctgatatcaagcttgcagttgaactgataaaattaggcgcgtatgattatatt
accaagcctctatatcccgacgaaattttaaataccattaataaggcaattgaaactcaa
attgccttaaatgtaaatcaatctgaaacctcgtctgaagcacctaagcaaaagactgca
aagcaagtttaccagcaggttgataattttgttaccggtcaaagcccggcttcaaaagag
ttaatgaagcagattcaattagttgcaccaacttcttatagcgtaattttaactggcgaa
agtggtacaggaaaggaatctgttgctaaagcaattcatttaaatagccccagaaaagac
cgcccttttgtggcaatggactgtggttctcttactaaagaactggcaggaagcgaattc
tttggtcatgaaaaaggatcctttaccggagcactttatactaaaataggtcattttgaa
atggccaatggtggaacactttttcttgatgaagtaggtaatctttcatatgatattcag
gctgcattattaagaactgtacaggagagaaaaattaaaagaataggaagtaccaaagag
attgatctggatgtaaggataattgttgctacaaatgaaaaccttggtaatgctattcag
aaagggaaattcagagaagatctgtaccataggtttaatgagttttctattggattaccg
ccgttaagtcaaagaggtgatgatattatggtgtttgcctatacatttttagatgtggcc
aaccaggagctttccagaaatgtacagggattttctgaagaagttgtagactgcttcctg
acctacaattggccgggtaatgtaagggaacttaaaaacgtggtaagaagggctactttg
cttaccgaaagtcaggaaatacaattaaaagcacttcctcttgaaatctctacttatgcc
aaggcttcggccattgaaagctcaatttcccgtattgaaaaaccaagggatttgaaaaat
gctgcccttgaagcggagtatgatgctattttaaaagttttaagagaagtgaattttaat
aaaacaaaggccgcaaaaatcctgaacatcgaccggaaaacattgtataacaaaatgaga
gcgattaatttggatacgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (27)   

Download RDF
DBGET integrated database retrieval system