KEGG   Pedobacter ginsengisoli: CPT03_18565
Entry
CPT03_18565       CDS       T05145                                 
Name
(GenBank) D-alanyl-D-alanine dipeptidase
  KO
K08641  zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
Organism
pgs  Pedobacter ginsengisoli
Pathway
pgs01502  Vancomycin resistance
pgs02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pgs00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CPT03_18565
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    CPT03_18565
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pgs01002]
    CPT03_18565
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pgs01011]
    CPT03_18565
  09183 Protein families: signaling and cellular processes
   01504 Antimicrobial resistance genes [BR:pgs01504]
    CPT03_18565
Enzymes [BR:pgs01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.13  Dipeptidases
    3.4.13.22  D-Ala-D-Ala dipeptidase
     CPT03_18565
Peptidases and inhibitors [BR:pgs01002]
 Metallo peptidases
  Family M15: zinc D-Ala-D-Ala carboxypeptidase family
   CPT03_18565
Peptidoglycan biosynthesis and degradation proteins [BR:pgs01011]
 Peptidoglycan biosynthesis and degradation
  Carboxypeptidase
   CPT03_18565
Antimicrobial resistance genes [BR:pgs01504]
 Gene sets
  Vancomycin resistance modules
   Vancomycin resistance, D-Ala-D-Lac type [MD:M00651]
    CPT03_18565
SSDB
Motif
Pfam: Peptidase_M15 VanY Peptidase_M15_4
Other DBs
NCBI-ProteinID: ATP58324
UniProt: A0A2D1U9Y2
Position
4457769..4458452
AA seq 227 aa
MKQYLYLLFLLCPFFISAQQYKGNPYGLQVIGSDKDYKASYAKNPQNELIEIKREIPNIK
LDIKYATKNNFMNQVMYKEARAFARKPVVTQLKKIQLVLNKKGYGLKIFDAYRPYAITLA
FYQKALNKNFVANPKKGSKHNRGCAVDLTLIDLKTGKELQMPTPYDSFAEQASPSYSNLP
PQVIKNRTLLITTMQAYGFRVIKNEWWHFDFIGWKNYALMDIPFESL
NT seq 684 nt   +upstreamnt  +downstreamnt
atgaaacagtacctgtatttattgttcttgctctgccctttctttatctcggcccagcaa
tacaaaggcaatccttatggcttacaggtcattggctcagataaagactacaaggcatcc
tatgctaaaaacccgcaaaacgaactcatagaaatcaaaagggaaattccaaatattaag
ctcgacattaagtacgccaccaaaaataatttcatgaatcaggttatgtacaaagaggcc
cgcgcttttgccagaaagcctgttgttacacagctaaaaaagatacaattagtccttaac
aaaaaaggctatggcctaaaaatcttcgatgcgtaccggccatatgccatcacactggca
ttctatcaaaaagccctgaataaaaactttgttgccaaccccaaaaaaggctctaaacat
aatcgtggatgtgctgttgacctcaccctgattgatttaaaaaccggaaaagagctgcaa
atgccaaccccatacgacagctttgccgagcaggcctcgccatcctattcaaacctaccg
ccccaggtaataaaaaacagaacattattaattacaacaatgcaagcttatggtttccgt
gtaataaaaaatgaatggtggcatttcgatttcatcggatggaagaactatgcgcttatg
gacatcccgtttgaaagcctataa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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