KEGG   Pedobacter ginsengisoli: CPT03_21745
Entry
CPT03_21745       CDS       T05145                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
pgs  Pedobacter ginsengisoli
Pathway
pgs03030  DNA replication
pgs03430  Mismatch repair
pgs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pgs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CPT03_21745
   03430 Mismatch repair
    CPT03_21745
   03440 Homologous recombination
    CPT03_21745
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pgs03032]
    CPT03_21745
   03400 DNA repair and recombination proteins [BR:pgs03400]
    CPT03_21745
Enzymes [BR:pgs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CPT03_21745
DNA replication proteins [BR:pgs03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CPT03_21745
DNA repair and recombination proteins [BR:pgs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CPT03_21745
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNA_pol3_gamma3 AAA_22 RuvB_N AAA_14 AAA_5 AAA_2 TIP49 Rad17 RNA_helicase AAA_24 AAA_30 DNA_pol3_delta_C AAA_18 VapE-like_dom AAA_7 PIF1 AAA_19 AAA_33 AAA_assoc_2 RnlB_antitoxin nSTAND3 ResIII AAA_16 QueC
Other DBs
NCBI-ProteinID: ATP58902
UniProt: A0A2D1UB97
Position
complement(5140342..5142162)
AA seq 606 aa
MENFIVSARKYRPATFETVVGQHHITGTLKNAIKNNQLAQAFLFCGPRGVGKTTCARILA
KTINCTNLTDDQEACGACDSCVSFQTGHSFNFHELDAASNNSVDDIRSLIEQVRIPPQAG
KYKIYIIDEVHMLSANAFNAFLKTLEEPPSYAIFILATTEKHKILPTILSRCQIFDFNRI
QVDDISGHLNKIAQRENISVEADGLHIIAQKADGGLRDALSMFDQIVSYTNKNLTYKSVI
DNLNILDYDYYFKLTQSLTSADVSNALILFDEILNNGFDGNNFINGLAGHLRNLLVAKDP
QTTKLLEVSENIKQKYISQSQQTPVSFILTALNLANQCDLNYKNSKNQRLQVELALIKMC
HIPSVLQLAQQPNNHSATDTDQIKKKTNVSSSEPAKNVVAEIENKAPEPVKLSEVAPLPK
QDPSPLPSIPVTKTINTAPATKIALKPLAEIKKVATLIPSLNDIGRVSDEEDGDEPKYIS
GNLREAFTYEQLLALWTQYANKAKDDGKINIYTLLSSSDPILDSSEEIIVHVEHKLQEGL
LQEEMIDFLNFLRPNLKNFSITIKAKQVARTVVNRLYTNTEKYQYMIEKNPKLEEMRKRF
NLDVNS
NT seq 1821 nt   +upstreamnt  +downstreamnt
atggaaaattttatagtatcagcccgtaagtatcgcccggcaacgtttgaaaccgttgtt
ggacaacatcacattactggtacgctaaaaaatgccattaaaaacaatcagctggcccag
gcatttttattctgcgggcctcggggtgtaggaaagactacttgcgcccgtattttggct
aaaactataaattgtactaatttaactgatgatcaggaagcttgtggagcatgtgattca
tgtgtttcgttccaaaccggtcactcatttaattttcatgaactcgatgctgcatcaaat
aactcggttgatgatatacgtagtttaattgaacaggtccgtatcccgccacaggccggt
aaatataaaatctatattatagatgaggttcacatgctatctgctaatgcctttaacgca
tttctgaaaacgcttgaagaaccaccatcttatgccatttttatattagctaccactgag
aagcataaaatactgcctactattttatcaagatgtcagatttttgattttaataggata
caagttgacgatatatctgggcatcttaataagattgcacagcgtgagaatatttctgtc
gaggctgatggattacatattatagcacaaaaggctgatggtggtttaagagacgcgctc
tctatgttcgatcagattgtaagttataccaataaaaatctaacctacaaatctgtaata
gacaacctgaatattcttgattacgattattattttaaacttactcagagcttaacaagc
gcagatgttagcaatgcgttaattttatttgatgaaattttaaataatggttttgatggc
aataattttataaacggattagccggccatcttcgtaatctactggttgctaaagatcct
caaactaccaaacttttagaggtaagtgaaaatattaaacagaagtatatttctcaaagt
cagcaaacgcctgtttcatttatacttactgcattaaaccttgccaaccagtgtgatctt
aattataagaatagcaaaaatcaacggctgcaggtagagctggctttaataaagatgtgc
cacatcccttcggtacttcaactagcccagcagcctaacaatcactccgcaactgacaca
gatcagattaaaaaaaaaactaatgtaagttccagcgaacctgcaaaaaatgtagtagca
gagattgaaaataaagcaccggaaccagttaaactttcagaagttgcaccattgccaaaa
caagatccgtctcctcttccttcaattcctgttacaaaaacaatcaatacagcacctgca
acaaagattgcactgaaaccgctagctgagataaaaaaggtggccacattaataccatcg
ttaaacgacattggccgcgtatcagatgaggaagatggtgatgaaccaaaatatataagc
ggtaacttaagggaggcttttacttatgagcagttattagctctgtggacgcaatatgca
aataaggcaaaagatgatggtaagataaacatatatactttacttagcagttcagatcca
atacttgattcttcggaagaaattatagttcacgttgaacacaaactgcaggaaggctta
ttacaggaagaaatgattgattttcttaattttttaaggccaaacctaaaaaacttcagc
attacaattaaagctaaacaggtggctagaactgtagtgaacaggctttacaccaatacc
gaaaaataccagtatatgattgaaaagaatcctaaactggaagagatgcgcaaacgcttt
aatcttgatgttaattcttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (26)   
   Pfam (26)   
All databases (39)   

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