KEGG   Porphyromonas gingivalis TDC60: PGTDC60_1817
Entry
PGTDC60_1817      CDS       T01516                                 
Symbol
abfD
Name
(GenBank) 4-hydroxybutyryl-CoA dehydratase
  KO
K14534  4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3]
Organism
pgt  Porphyromonas gingivalis TDC60
Pathway
pgt00650  Butanoate metabolism
pgt01100  Metabolic pathways
pgt01120  Microbial metabolism in diverse environments
pgt01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:pgt00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00650 Butanoate metabolism
    PGTDC60_1817 (abfD)
Enzymes [BR:pgt01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.120  4-hydroxybutanoyl-CoA dehydratase
     PGTDC60_1817 (abfD)
 5. Isomerases
  5.3  Intramolecular oxidoreductases
   5.3.3  Transposing C=C bonds
    5.3.3.3  vinylacetyl-CoA Delta-isomerase
     PGTDC60_1817 (abfD)
SSDB
Motif
Pfam: HpaB_N HpaB DUF5354
Other DBs
NCBI-ProteinID: BAK25966
Position
complement(1887019..1888479)
AA seq 486 aa
MMTSEQYVESLRKLNLKVYFMGEKIENPVDHPMIRPSMNSVAMTYKLAEMDEYKHLMTAT
SNLTGKQVNRFCHLHQSTEDLKDKVKMQRLMGQKTASCFQRCVGMDAFNAIYSTTYEMDQ
ALGTTYHKRFIEYMKYVQDNDLVVDGAMTDPKGDRGLSPSEQADPDLYLHIVEVREDGIV
VSGAKAHQTGAVNSHEHLIMPTIAMREADADYAVSFAVPSDAEGVIMIYGRQSCDTRKME
EGADIDLGNSEFGGHEALVVFDRVFVPNERVFMCKEYQFAGMMVERFAGYHRQSYGGCKV
GVGDVLIGAAALAADYNGVPKASHIKDKLIEMIHLNETLYACGIACSSEGTQMKAGNYMI
DLLLANVCKQNITRLPYEIARLAEDIAGGLMVTMPSQQDFRHPEIGPIVKKYLAGATGKS
TENRMRVLRLIENITLGTAAVGYRTESMHGAGSPQAQRIMIARQGDLEGKKKLARAIAHI
DESLDK
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgatgactagcgaacagtacgtagaaagtcttcggaaacttaatctgaaggtttacttc
atgggtgaaaagatcgaaaaccctgtagatcatcccatgattcgtccctcaatgaattca
gtagctatgacttataagcttgctgagatggacgaatacaagcatttaatgacagcaact
tcaaacttgactggtaagcaagtgaatcgtttctgccatctacatcagagcacagaggat
ctgaaagacaaagtgaagatgcagcgtctcatgggacaaaaaacagcttcatgcttccag
cgttgtgtgggaatggatgcattcaatgccatctattctactacttacgaaatggatcaa
gctctgggtaccacttatcacaagcgtttcatcgagtacatgaaatatgtacaagacaac
gacttggtcgtagatggagccatgacagaccccaaaggggatcgcggtttatctccctca
gaacaagccgatccggatctttatctgcacattgttgaagttcgtgaagatgggatcgtc
gtttccggtgcaaaagcacaccaaaccggagcagtcaattcgcacgagcatctgatcatg
cctacgatcgctatgcgcgaagctgatgctgattatgccgtttcttttgctgttcccagt
gatgcagaaggcgttattatgatctatggtcgccagtcatgcgacactcgcaaaatggaa
gaaggggcagacattgacctcggcaactctgaattcggcggacatgaagctcttgttgta
ttcgaccgcgtattcgtgcccaatgaacgcgtgttcatgtgcaaagaataccagtttgca
ggtatgatggtagaacgtttcgccggataccaccgtcagtcttatggaggatgtaaagta
ggtgttggtgatgtacttatcggtgcagctgctcttgcagcagactacaatggagttcct
aaggcatctcacattaaggataaactcattgagatgatccacctgaatgaaaccctttat
gcttgcggtattgcatgctcttcagagggaactcagatgaaagccggcaactatatgatc
gatttgttgttagctaatgtttgtaagcaaaatatcacccgccttccttatgaaatagct
cgtttggcagaagatattgcaggaggtttgatggtaaccatgccttctcaacaagacttc
cgccatccggaaataggcccgatcgtaaagaaatatcttgcaggtgcaacaggcaaatcg
acagaaaaccgtatgcgtgttctgcgtttgatagagaatatcacgctgggaacagctgcc
gtcggttatcgaaccgagtctatgcacggagccggatctcctcaagctcagagaatcatg
atcgctcgtcagggagatcttgagggcaagaaaaagcttgcacgagcgattgctcatatc
gacgaatcactcgataagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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