KEGG   Polymorphum gilvum: SL003B_3428
Entry
SL003B_3428       CDS       T01458                                 
Name
(GenBank) RNA pseudouridylate synthase family protein
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
pgv  Polymorphum gilvum
Brite
KEGG Orthology (KO) [BR:pgv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pgv03009]
    SL003B_3428
Enzymes [BR:pgv01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     SL003B_3428
Ribosome biogenesis [BR:pgv03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    SL003B_3428
SSDB
Motif
Pfam: S4 PseudoU_synth_2
Other DBs
NCBI-ProteinID: ADZ71849
UniProt: F2J015
Position
3700448..3702136
AA seq 562 aa
MTDRKSPSRSRGNSPRGPRTASGSAAAKGGARGAGAPKNRKEKQGSGAKPPRPEAGTRKP
RPQPAPATAAADGAPSGPDAIPARDGERIAKVMARAGLCSRRDAEAWILAGRVAVNGKIL
ESPALTVTYDDEIVVDGQPLPQKERTRLWLYHKPRGLVTTARDPEGRPTVFDSLPKDLPR
VLAVGRLDINTEGLLLLTNDGGLARVLELPATGWLRRYRVRAYGKIEQSQLDSLADGIAI
DGILYGTIEAVLDKQQGDNVWLTVGLREGKNREVKRVLEHLGLSVNRLIRLSFGPFQLAD
LGEGEVREIRGRVLRDQLGDKLAEAAGADFEAPVLTQAEPDKPLKKKENIQKSRAGGEWM
SAREGAAATRTGGRRSASDEAPERRRKGAGNPPETRRPSGKSQDRPQDRPQKVSPRSRFR
LTSEPRPRSRAPERDEAPRPPARRIWSEEGLVEDKQQDTRLARKARPERTERPEPRDERR
REDRPRSERPRSERPFRDRAGGDERPPRGGPKGPGRGGAGKGPRTGPGKGPGRSGMRSEG
GGSGRGGGHGPGRGGGKPRGRP
NT seq 1689 nt   +upstreamnt  +downstreamnt
atgaccgacaggaaatccccctcccggtcccgcggcaacagcccgcgcgggccccgtacc
gcatccggctcggcagccgccaagggcggcgccagaggcgccggagcgcccaagaatcgc
aaggaaaaacaaggatctggcgcaaagccgccacggccggaggcgggcacgcgcaagccc
cgcccgcagcccgcgccggcgacggcggcagccgatggcgcgccttccgggcccgacgct
atccccgcccgcgacggcgagcgcatagccaaggtgatggcgcgcgccgggctctgctcg
cgccgcgacgccgaggcctggatcctcgccgggcgcgtcgccgtcaacggcaagatcttg
gaaagccctgcccttacagtgacttacgacgacgagatcgtggtcgacgggcaaccgctg
ccgcagaaggaacgcacccggctgtggctttaccacaagccgcgcgggctggtcaccacg
gcccgcgacccggaggggcgtccgacggttttcgacagtcttcccaaggacttgccacgg
gttcttgcggtcggccggctggacatcaacaccgagggcctgctgcttctgaccaacgac
ggcggcctggcgcgggtgctggaattgcccgccaccggctggctgcgccgctaccgggtc
cgcgcctacggaaaaatcgagcaaagtcaactcgatagcctcgccgacgggatcgccatc
gacggcattctctacggcaccatcgaggccgttctggacaagcagcagggggataacgtc
tggctgacggtcggcctcagggagggcaagaaccgcgaggtcaagcgcgtcctggagcac
ctcggactgtccgtcaaccgcctgatccgactgtctttcggtccgttccagctggccgac
ctcggcgagggcgaggtcagggagatccgcggccgggtgctgcgcgaccagctgggggac
aagctggcggaggccgcgggggcggatttcgaggcgccggtcctgacccaggcagaacca
gacaagcccttgaagaagaaagagaacattcagaaaagtcgcgccggaggcgagtggatg
agcgcccgcgagggggcggcggcgacgcgcaccggcggccgccggagcgcgtccgacgaa
gcgccggaaaggcgccggaaaggcgccggaaaccctcctgagacccgccgaccttccggc
aaatcccaggacaggccccaggaccggcctcagaaggtgtcgccgcgcagccgcttccgc
ctgaccagcgaaccgcgcccgcgctcccgcgcgcccgaacgcgacgaggccccgcgcccg
ccggcacggcggatctggagcgaggagggcctggtcgaggacaagcagcaggacacgcgg
ctcgcccgcaaggcgaggccggagcgcaccgagcgaccggagcctcgcgacgagcggcgt
cgggaagatcggccccggagtgagcggccccggagcgagcggccgttccgcgaccgagcc
ggcggcgacgagcgtccgccgcgcggcggaccgaagggtcccgggcggggcggggcaggc
aagggcccgcgcaccggacccggcaaaggcccggggcggagcggcatgcgaagcgaaggc
gggggctcgggtcggggcggtgggcacggtcccggccggggcggcggcaagccgcgcggg
cggccgtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (74)   
   KEGG ORTHOLOGY (1)   
   RefGene (71)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (82)   

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