KEGG   Pseudoalteromonas translucida TAC125: PSHAa1096
Entry
PSHAa1096         CDS       T00282                                 
Symbol
uvrD
Name
(GenBank) DNA helicase II.
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
pha  Pseudoalteromonas translucida TAC125
Pathway
pha03420  Nucleotide excision repair
pha03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pha00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PSHAa1096 (uvrD)
   03430 Mismatch repair
    PSHAa1096 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pha03400]
    PSHAa1096 (uvrD)
Enzymes [BR:pha01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PSHAa1096 (uvrD)
DNA repair and recombination proteins [BR:pha03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PSHAa1096 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     PSHAa1096 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C_2 AAA_30 UvrD_C T2SSE Peptidase_M17_N_1
Other DBs
NCBI-ProteinID: CAI86171
UniProt: Q3IKC7
Position
I:1141826..1143673
AA seq 615 aa
MTKLFKPTTADKEIEECLVAAQSFSVVAGAGSGKTTSLVTALNFLRDKVGSDLRKNGQKI
VCITYTKRATAVIEERLGFDELYLVSTIHSFLWSSISRFTKDIRVALRDSLIPNHIAKAR
EKDNGRNSQSAQRARARIVELTEELELLDQVTTFKYDESQFSSFSKGQIGHDDVIDLAAY
LISESLILQRGFGFQFPYIFVDEAQDTFDSVIAAFNTICSGEGLPMVAYFGDPMQQIYDN
GVGVFDGPEGFRLIEKEENFRSATSIVALTNKLRNDIQQMPAGDSALNVGSVLLTLIETE
APAGPRGRYTPEQLDLSLSKFDEALQYIGWQENKEAKRLFLVRQMIARRLGFSSLQNLFT
GVYASNKAQDEYIDGDHFLVKPFIKSLCPLIVSMQNGNKKQIVGILREETPAFDILGINK
DRPLKEMLDIAKDLVNELSEMWVERPIGDILRYAKENRLCTISERLAATLDREPRVEAYD
NAIHAEEKSDWLADEFLSMSTNELLPYYGFVSDHTALSTQHGSKGEEYEDVLVVFDDIEA
SWNMYSFNKLLTPAAAGDGTEGQLARSRKLAYVCFSRARMNLRIFLYCQDAKAARAELVG
SELLDSEQIEILPSR
NT seq 1848 nt   +upstreamnt  +downstreamnt
atgaccaaactgttcaagccgactacagcagataaggaaatcgaagaatgccttgtggcc
gctcagtctttttctgtagtagcaggagctggttctgggaagacaacttcactcgtgaca
gcactaaatttccttcgtgacaaagttggaagtgatttaagaaaaaatggccagaaaatc
gtttgtattacctatacaaagcgagcaaccgctgtaattgaggaacggcttgggttcgat
gaactttatttggtttcaacaattcatagtttcctttggagttccatcagccgatttacg
aaagatattcgtgtggctcttcgtgatagcctcattccaaaccacatcgcaaaagcacgt
gaaaaagacaatggtcgtaactctcaatcagctcagagagcgcgcgctcggattgttgaa
ttgacggaggaattagaacttttagatcaagtgactacgtttaaatatgatgagagccag
tttagcagcttttcaaaaggacaaatcggtcatgatgacgtcatcgacttagctgcatac
ttgatttccgagagtcttattttgcaacgtgggtttggtttccagtttccctacattttt
gtcgatgaagcgcaggatacatttgatagtgttattgccgcattcaacacaatttgttcg
ggtgaaggtcttccgatggttgcctattttggcgaccctatgcaacagatttatgataat
ggagttggtgtttttgatgggcctgaagggttccggttaatcgagaaagaggaaaatttt
cgatcggctacctcaatcgttgcgctgactaataagcttcggaatgacattcagcaaatg
cccgctggtgatagcgccttgaatgtaggtagtgtgttgctgaccttgattgaaacagaa
gcacctgctgggcctcgtggaagatatacacccgaacaattagacctgtctctatcgaag
tttgatgaagcactgcaatacatcggttggcaggaaaataaggaggctaaaaggctgttc
ttggttcgccagatgattgcaagacgccttggtttttcatcactacaaaatctattcaca
ggagtgtatgcctcgaacaaagcacaagatgagtatatcgatggggatcatttcttagtt
aaaccatttatcaaatcgctatgccccttgatagtttcaatgcagaatggcaacaaaaaa
cagattgtcggtatattgcgggaagagacgcctgctttcgatatactaggcataaataag
gatcgccctcttaaggaaatgctagatatcgccaaagatcttgtaaacgagctttccgaa
atgtgggttgagcgtccaataggagatatcttaaggtatgcaaaagaaaatcgactttgc
actatttctgagcgtttggcagcaacattagatagagaaccaagagttgaggcttacgat
aacgcgattcacgctgaagaaaaatctgattggttagccgacgaatttttatcaatgtca
acgaatgagctcctcccatattacggattcgtttctgatcacacggcactcagtactcag
cacggatcaaaaggggaagaatacgaagatgtcttagttgtttttgatgatatcgaagcc
agctggaacatgtatagcttcaataagcttctgacgcccgctgctgctggagatggcaca
gaaggtcaattagctcgcagtaggaaattggcatatgtttgcttttcacgagctcggatg
aacctcagaatatttctttattgtcaggatgcaaaagcggctcgtgctgaactcgtcgga
agtgagttattagatagcgagcagatagaaatactgccttcgaggtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (36)   

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