KEGG   Planococcus halocryophilus: BBI08_06610
Entry
BBI08_06610       CDS       T04473                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
phc  Planococcus halocryophilus
Pathway
phc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:phc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BBI08_06610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phc03019]
    BBI08_06610
   03016 Transfer RNA biogenesis [BR:phc03016]
    BBI08_06610
Enzymes [BR:phc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     BBI08_06610
Messenger RNA biogenesis [BR:phc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BBI08_06610
Transfer RNA biogenesis [BR:phc03016]
 Prokaryotic type
  tRNA degradation factors
   BBI08_06610
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 SPATA25 S1_2
Other DBs
NCBI-ProteinID: ANU13532
UniProt: A0A1C7DQ58
Position
complement(2161454..2163571)
AA seq 705 aa
MEQTKKVYTLDWAGRELQVEVGQLAKQANGAALIRYGDTAVLSTATASKTPKPLDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKATLTSRLIDRPIRPLFPDGFRNEVQVISMVMSV
DQDCPSEMAAMFGSSLALMISDIPFGGPIAGVIVGLIDGQYIINPTNDQLEQSSINLIVA
GTKDAINMVEAGAKEVSEEIILEAIMFGHEEIKKLIAFQEQIAEEVGKAKSDIKLYELDA
ELTSSLKDAVETDLNTAVQINEKQARNEAIDEVKARAMAAYEESDDAVKKQAGQILDKMV
KDEVRRLITDEKIRPDGRGPSEIRPLSSEVGILNRTHGSGLFTRGQTQAMSICTLGALGD
VQIIDGLGIEDTKRFMHHYNFPLFSVGETGFLRGPGRREIGHGALGERALEAVIPNEKDF
PYTIRLVAEVLESNGSTSQASICASTLAMMDAGVPLTAPVAGIAMGLVKKGDNYTVLSDI
QGMEDHLGDMDFKVAGTAKGITALQMDIKIDGLSREILEEALTQAQIGRIHILESMLATI
AEPRTTLSKYAPKIIMVKINPDKIRDVIGPGGKVINKIIDETGVKIDTEQDGTIFISSVD
EEMNAKAKAMIENIVREAKVGEYYEGKVKRIEKFGAFVELFPGKDGLLHISEIQEERTKE
VEDVLKMDQIIQVKVIEIDRQGRVNLSRKVVLKEQKEAAEKQNQE
NT seq 2118 nt   +upstreamnt  +downstreamnt
atggagcaaacaaaaaaagtctacacactagattgggcaggccgcgaattacaagtagag
gttggccaattagcaaaacaagcaaatggggctgcattaatccgttatggtgatacagca
gtcttatcaactgcaacagcatcaaaaacgccaaagccattagatttcttcccgttaact
gtaaactacgaagaacgtctttatgcagttggtaaaattccaggtggattcattaaacgt
gaaggacgtccgtctgaaaaagcgacgttaacaagccgtttaatcgatcgtccaattcgt
ccattattcccagacggtttccgtaatgaagttcaagttatttcgatggttatgtctgta
gatcaagattgcccatctgaaatggctgcaatgttcggatcttcattagctcttatgatt
tcggatattccttttggcggacccattgctggcgtaatcgttggattgatcgacggtcag
tatattattaacccaacaaacgatcagcttgagcaaagctcaatcaacttaatcgtagct
ggaacaaaagatgcgattaacatggttgaagcaggagcaaaagaagtttctgaagaaatc
attttagaagcaattatgttcggtcacgaagagattaagaaattgatcgctttccaagaa
caaattgctgaagaagttggtaaagcaaaatctgacatcaaactatatgaattggatgca
gaattgacatcatctcttaaagacgctgttgaaactgatttgaacacagctgttcaaatt
aacgaaaaacaagcgcgcaacgaagcaattgatgaagtcaaagcacgcgctatggcagca
tatgaggaatctgacgatgctgttaaaaaacaagcaggtcaaattttagataaaatggtg
aaagatgaagttcgtcgcttaatcacagacgaaaaaattcgtccggatggccgtggacct
tctgaaatccgcccattgtcttctgaagttggcattttgaatcgtacgcacggttctggt
ctatttacgcgtgggcaaacgcaagcgatgagcatttgtacgctaggtgctttaggtgat
gttcaaatcatcgatggtcttgggattgaagatacaaaacgctttatgcaccattacaac
ttcccattgttctcggttggtgaaactggattccttcgtggaccaggacgccgagaaatc
ggtcacggggcacttggtgagcgcgcattagaagctgttattccaaatgaaaaagatttc
ccttacacaattcgtcttgttgcagaagtacttgaatcgaacggttcaacttcacaagca
agtatttgtgcttcaacacttgcaatgatggatgcaggtgtacctttgacagctccagtt
gcaggtattgcaatgggtctagtgaaaaaaggcgataactatactgtattatctgatatc
caaggtatggaagatcatcttggcgatatggactttaaagtagcgggtactgcaaaaggc
attactgctcttcaaatggacatcaagattgacggtctttctcgtgaaattttagaagaa
gccttgactcaagctcaaattggccgtatccacattttagaatcaatgttggcgacaatt
gctgaaccaagaacaactctttctaaatacgcaccgaaaatcattatggtgaagatcaac
ccagacaagatccgcgatgttattggacctggtggtaaagtgatcaacaaaatcattgat
gaaactggcgttaaaattgatactgagcaagacggtacaatctttatttcatctgttgat
gaagaaatgaacgcaaaagcgaaagcaatgattgaaaatatcgttcgcgaggcgaaagtc
ggcgaatattacgaaggtaaagtgaaacgtatcgagaagtttggcgcattcgttgaattg
ttcccaggtaaagatggactgcttcacatttctgaaatccaagaagaacggacaaaagaa
gtggaagacgtgctgaaaatggatcaaatcatccaagtcaaagtaattgaaattgaccgt
caaggccgtgtaaacttatcacgtaaagttgttttgaaagaacaaaaagaagcagctgaa
aaacaaaaccaagaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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