KEGG   Pedobacter heparinus: Phep_3328
Entry
Phep_3328         CDS       T00978                                 
Name
(GenBank) UDP-N-acetylmuramoylalanine/D-glutamate ligase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
phe  Pedobacter heparinus
Pathway
phe00470  D-Amino acid metabolism
phe00550  Peptidoglycan biosynthesis
phe01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:phe00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Phep_3328
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Phep_3328
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:phe01011]
    Phep_3328
Enzymes [BR:phe01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     Phep_3328
Peptidoglycan biosynthesis and degradation proteins [BR:phe01011]
 Precursor biosynthesis
  Amino acid ligase
   Phep_3328
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C MurD_N MurD-like_N 3HCDH_N Pyr_redox_2 AlaDh_PNT_C DAO Pyr_redox NAD_binding_8
Other DBs
NCBI-ProteinID: ACU05522
UniProt: C6Y479
Position
complement(3948273..3949616)
AA seq 447 aa
MEKKRIAILGAGESGVGAAMLAQKHGYDVFVSDFGTIPSQYKEKLEALNIVFEENTHTAA
EILKAVEVIKSPGIPDTAGIIKEIRSRNIPVLSEIEFAKRYTKAKTICITGSNGKTTTTM
LTYHILKNAGLNVGLAGNIGHSFAAQVASADFDWYVLEISSFMLDDMYDFKADIAVLLNI
TPDHLDRYDYKLGNYAASKMRITQNQTSEDIFIYCADDEETLKALKNVKVDSKTYPFSIR
KKIEKGAYLESNNIHININLNDQLTMSITELALQGKHNIYNSMASGIVAKVLDIRNTAIR
ESMGDFKNIEHRLEHVARISGVDYINDSKATNVNSTWYALESVGTDVILIMGGVDKGNDY
DMLKDMVRQKVKAIVCLGKDNKRIHEAFEDDVEIIVNTFSAHEAVQVAYHLAKKGNTVLL
SPACASFDLFKNYEDRGNQFKAAVKEL
NT seq 1344 nt   +upstreamnt  +downstreamnt
atggaaaagaaaaggatagcaattctgggagcgggagaaagcggggtaggtgcagcaatg
ctggcacagaagcatggttatgatgtattcgtgtcagattttggtacaattccttcacaa
tacaaggaaaagcttgaggcacttaacattgtatttgaagaaaacacgcatacggcagcc
gagatcctgaaagcggttgaagtgattaaaagtcccggtatacctgatacagccggtatc
attaaagagataagatcccggaatattccggtgctttctgaaattgaatttgcaaaacgg
tatacgaaagcaaaaactatatgcattacggggtctaatggtaagaccactactaccatg
ttaacttaccatattctgaaaaatgcaggtttaaacgtagggcttgcagggaatatcggg
catagctttgccgcgcaggtggctagtgctgattttgactggtatgtactggagatatct
agctttatgctggatgatatgtatgatttcaaagcggatattgctgtgctgttaaacata
acacccgatcatttagacaggtacgactataaattgggtaattatgctgcatcaaaaatg
cgcattacgcaaaatcagaccagtgaagatatttttatttactgtgctgatgacgaagaa
actttaaaagcgttgaaaaatgttaaggtggattcaaaaacatatcctttttccatccgg
aaaaaaatcgaaaagggagcctatctggaaagcaacaacatacacatcaatataaaccta
aacgatcaattaaccatgtctattacagaattagccctgcagggaaagcacaatatttat
aactctatggcatcgggcatagtagctaaggtattagatatcagaaataccgctatacgc
gagagtatgggggattttaaaaatattgaacacaggctggagcatgttgcgaggatttcc
ggtgttgattatatcaacgattcaaaggcaacaaacgtaaattctacctggtatgcgctg
gaaagtgtagggactgatgtgatcctgattatgggtggggtagataaaggaaacgattat
gatatgttgaaggatatggtccgtcagaaggttaaggcaattgtatgtttaggtaaagac
aataagcggatccatgaggcttttgaagatgatgtagaaattattgtaaacacgttttct
gctcatgaggcagttcaggtggcctatcatctggccaaaaaaggaaatacagtgctgttg
tcacctgcttgtgcaagttttgacctgtttaagaattatgaggacaggggcaaccagttt
aaggcggcagttaaagaattatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (58)   

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