KEGG   Pedobacter heparinus: Phep_3557
Entry
Phep_3557         CDS       T00978                                 
Name
(GenBank) recA protein
  KO
K03553  recombination protein RecA
Organism
phe  Pedobacter heparinus
Pathway
phe03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:phe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Phep_3557
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:phe03400]
    Phep_3557
DNA repair and recombination proteins [BR:phe03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Phep_3557
    RecFOR pathway proteins
     Phep_3557
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    Phep_3557
SSDB
Motif
Pfam: RecA RecA_C Rad51 ATPase ATPase_2 AAA_24 AAA_25 AAA AAA_16 ABC_tran AAA_22 MobB TrwB_AAD_bind AAA_35 cobW nSTAND3 AAA_14 DnaB_C AAA_28 CobU CLP1_P NB-ARC RNA_helicase
Other DBs
NCBI-ProteinID: ACU05748
UniProt: C6XTH0
Position
4231683..4232696
AA seq 337 aa
MSTNADKLKALQLTLDKLEKSYGKGTVMKLGDNAVEPIESISTGSISLDIALGIGGVPKG
RIIEIYGPESSGKTTLATHIIAEAQKKGGIAAIVDAEHAFDKGYAKKLGVDVDNLLISQP
DNGEQALEIADNLIRSGAIDVIVIDSVAALVPKAEIEGEMGDSKMGLHARLMSQALRKLT
GTISKTGCCCIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRTSQIKDSDEVSG
NRVKVKIVKNKVAPPFRIAEFDIMFGEGISKTGEIIDLGVDFNIIKKAGSWFSYGDTKLG
QGRDAVKQLLMDNPELSEEIEAKIRAEVTGEKLEEKV
NT seq 1014 nt   +upstreamnt  +downstreamnt
atgagcacaaacgcagacaaattaaaagcactacaacttactttagataagttagaaaaa
tcatacggtaaaggtactgtgatgaaacttggggataatgctgtagagcctattgaatcc
atttctaccggatctatcagccttgacattgctttgggtattgggggtgtaccaaaagga
aggattattgagatatacgggcctgaatcttcaggtaaaacaaccttagctacacacatt
atagctgaagcacagaaaaaaggtggtatagctgcaattgtggatgcggaacatgctttt
gataaaggctatgccaaaaaattgggtgttgatgtagacaacctgctgatctctcagccg
gacaatggcgaacaggccctggaaattgcagataacctgatccgctctggtgcgattgat
gtaatcgtgatcgactctgtagccgcattggtaccaaaagcagagattgaaggcgaaatg
ggtgattctaaaatgggcttacatgcgcgcctgatgtctcaagccttacgtaaattaaca
ggaaccatttctaaaaccggatgttgctgtattttcatcaaccagctgcgtgaaaaaatt
ggggtaatgtttggtaatcctgagactacaaccggtggtaatgccttgaaattctatgcc
tcagtacgtctcgatatccgcaggacttcccagatcaaagattctgatgaagtttccggg
aacagggtaaaagtgaaaattgtaaaaaataaagttgccccccctttccgtattgctgaa
tttgacattatgtttggtgagggaatctctaaaacgggtgagatcatcgacctcggtgtt
gattttaacatcatcaaaaaagcaggttcatggttctcttatggtgataccaagcttgga
caaggtagagatgccgtgaaacaactgttaatggataacccagaattgtctgaagaaatt
gaagcaaaaatacgtgctgaagtaaccggagaaaaactggaagaaaaagtttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (23)   
   Pfam (23)   
All databases (49)   

Download RDF
DBGET integrated database retrieval system