KEGG   Pedobacter heparinus: Phep_3751
Entry
Phep_3751         CDS       T00978                                 
Name
(GenBank) sigma-54 factor interaction domain-containing protein
  KO
K07713  two-component system, NtrC family, response regulator HydG
Organism
phe  Pedobacter heparinus
Pathway
phe02020  Two-component system
Brite
KEGG Orthology (KO) [BR:phe00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Phep_3751
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:phe02022]
    Phep_3751
Two-component system [BR:phe02022]
 NtrC family
  HydH-HydG (metal tolerance)
   Phep_3751
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA AAA_2 AAA_22 Mg_chelatase cREC_REC KaiA_N AAA_16 nSTAND3 AAA_30
Other DBs
NCBI-ProteinID: ACU05942
UniProt: C6XUT4
Position
4492167..4493492
AA seq 441 aa
MAKILIIEDDSTFSQVLEGFFTKQGHEPQVVNNVKKAFKITDEQSFDLLLIDYRLPDGTG
LDILSHVLEKGLLQPVIIMTSFNDVRTAVKSIQLGAFDYITKPVNPDELMMIIKNALGKK
ENSRNSAVEHADAIKGKSAIADKLYEHINLVAPTDMSVIIQGESGTGKEYAARALHAQSK
RRDKPFVAIDCGALSKDLAASELFGHTKGAFTGALNDKKGQFEAANSGTLFLDEVGNLSY
EVQVKMLRALQERIIQPLGSTKTIKVDVRIITATNDDLKTSVANGLFREDLYHRLNEFKI
QLPALRDRGKDIELFISHFIKLSNSELDRNVQSISPQAKELLLRYDWPGNLRELKNVIKR
MVLLTPGETAEVDALPEEMIISINHSPRPSTSDLKVINELNEKALITETLVKVKYNKSKA
AKLLNIDRKTLYSKMERYGIE
NT seq 1326 nt   +upstreamnt  +downstreamnt
atggcaaaaatactgatcattgaagacgactctactttttctcaggtattggaaggtttt
tttacaaaacagggccacgaaccccaggtggtaaacaatgtaaaaaaagcttttaaaata
acagacgaacaaagctttgacctgttgttgattgattaccgtttacctgatggaacggga
ttggatattctttcgcacgttctggaaaaagggttgttacaaccggttattatcatgacc
agctttaacgatgtcagaacagccgtaaaatctatacagcttggtgcttttgattacatc
acaaaacccgttaatccggatgagttgatgatgatcattaaaaatgccctgggcaagaag
gaaaacagccgcaatagcgctgttgaacatgcagatgctataaaaggtaaaagtgctatt
gccgataaactttatgagcacattaacctggtggcccctaccgacatgtctgtaattata
cagggtgaaagcggcacgggtaaggagtatgctgcgcgtgccctacatgcgcaaagtaag
cgcagggataaaccttttgtggctatagactgtggtgccctgtcaaaagacctggctgcc
agtgaattatttggccataccaaaggtgcttttacaggtgctttaaatgataaaaaaggg
cagtttgaagctgcaaacagtggtacgctgtttctggatgaggttgggaacttaagttat
gaagtacaggttaaaatgttgcgcgccctgcaggaaagaattatacagccgctgggcagt
accaagaccattaaagtagacgtgcggatcattacggccacaaacgatgatcttaaaacc
agtgttgccaatggtctgttcagagaagacctttaccaccggcttaatgaatttaagata
cagttaccggctctgagggacaggggtaaagacattgagctttttatcagccacttcatc
aaactttccaattcggaattggacaggaacgtacaaagcatatctcctcaggccaaagag
ctgttgctccggtacgactggccgggaaaccttcgtgagctcaaaaatgtgatcaagcga
atggtgctgcttacacctggagaaactgcagaagttgatgctcttccagaagaaatgatc
atttctataaaccattctccccggccaagtacttcggaccttaaagtgattaacgagtta
aacgaaaaagcattgattacggaaaccctggttaaagtaaagtacaacaaatctaaagcg
gcaaaactcctcaatattgaccgtaaaaccttgtacagtaaaatggaacgttatggcatt
gaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (29)   

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