KEGG   Providencia heimbachae: NCTC12003_00354
Entry
NCTC12003_00354   CDS       T05509                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
phei  Providencia heimbachae
Pathway
phei03030  DNA replication
phei03410  Base excision repair
phei03420  Nucleotide excision repair
phei03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:phei00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NCTC12003_00354 (polA)
   03410 Base excision repair
    NCTC12003_00354 (polA)
   03420 Nucleotide excision repair
    NCTC12003_00354 (polA)
   03440 Homologous recombination
    NCTC12003_00354 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:phei03032]
    NCTC12003_00354 (polA)
   03400 DNA repair and recombination proteins [BR:phei03400]
    NCTC12003_00354 (polA)
Enzymes [BR:phei01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NCTC12003_00354 (polA)
DNA replication proteins [BR:phei03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     NCTC12003_00354 (polA)
DNA repair and recombination proteins [BR:phei03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     NCTC12003_00354 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NCTC12003_00354 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH_5 Prok-E2_E DUF2529 HHH
Other DBs
NCBI-ProteinID: SQH11691
Position
1:400477..403275
AA seq 932 aa
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLVMQYKPSHVAV
VFDAKGKTFRDELFESYKSHRPPMPDDLREQIAPLHEMVEAMGLPLLVVPGVEADDVIGT
LAREASQKGMSVLISTGDKDMAQLVEPNVTLINTMTNTILGPDEVKDKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTALALLQGIGSLESIYNDLDAIAPLGFRGSKTLAPKMAENR
ELAFLSYQLATIKTDVELEKCCEELQVAQPDPDKLHQLFSRYEFKRWLVDVENGSWMEAK
AGKAPTNRATATKPVAAATPVAPAPTLSAENYQTILEKADLVHWIEKLTSAPLFAFDTET
DSLDTQEARLVGMSFAIEAGHAAYLPLGHDYLDAPVQLPLDEVIALMKPILENEKILKVG
QNLKYDAEVLENYGIELKGIAFDTMLESYVLNSVAGMGRHDMDSLADRHLNHKTVSFEEI
AGKGKKQLTFNQIALEEAANYAAEDADVTLLLHQALYPQLEAEPKLAHIFHNIEIPLVPV
LVRMERKGVLIDASVLAAQSKIITARLAELEKEAFELAGEEFNLASPKQLQVILFEKLQL
PIIKKTPSGAASTNEEVLEELALNHALPKLLLEHRSLAKLKSTYTDKLPLMISPRTQRVH
TSYHQAVTATGRLSSRDPNLQNIPVRTEEGRRIRQAFIARKGYKVMAADYSQIELRIMAH
LSQDKGLLTAFAEGKDIHKATAAEVFGVALEDVTNDQRRSAKAINFGLIYGMSAFGLARQ
LGIPRGEAQRYMDLYFERYPGVLRYMENTRLQASEQGYVETLEGRRLYLADINASNGMRR
KAAEREAINAPMQGTAADIIKKAMIAVDEWLQTEKPNADMLMQVHDELVFEVKESELEHV
QEKVQALMEQSMTLDVPLKVDVGVGDNWDEAH
NT seq 2799 nt   +upstreamnt  +downstreamnt
atggctcagattgcagaaaatccccttattttggtcgatggttcctcttacctgtaccgt
gcatatcatgcatttcctccactgaccaatagcgcaggggagcctactggagccatgtat
ggtgtacttaacatgctacggagtttggttatgcagtataagccaagtcatgtggccgtt
gtctttgatgccaaagggaaaacatttcgtgatgaactgttcgaaagttataaatcacac
cgccctccgatgcctgacgacttgcgtgaacaaatagcgcctctgcatgaaatggtggaa
gcgatgggcttgccattattggttgttccaggggtagaggcagacgacgttattggtact
ttagcacgcgaagctagccaaaaagggatgtctgttctgatcagcaccggcgataaagat
atggctcagctggtggagccgaatgtcacgctaatcaataccatgactaacaccatttta
ggacccgatgaggtcaaagataaatatggtgtgccacctgaactgattattgatttcctt
gcattaatgggcgattcatctgacaacattcccggagtccctggggtcggtgagaaaact
gcacttgcgttactgcaaggaattggcagtttagaatctatttataatgatcttgatgcc
attgcaccattaggttttcgaggatcgaagacattagcgcctaaaatggctgaaaatcgt
gaattagcgtttttatcctaccaactagcgacgataaaaacagatgtagaactcgaaaag
tgctgtgaagaattacaggtagcacagcctgatccagacaaacttcatcaactgtttagt
cgctatgaattcaaacggtggttagtcgacgttgaaaatggtagctggatggaagccaag
gcaggtaaagcccccacaaatcgtgcgacagcgactaagcccgttgcggcagctacacct
gtagcacctgcacctacattgagtgcggaaaactatcaaacaattctagaaaaagcagat
ttagtgcattggatagaaaaattaacttcagcgccattgtttgcttttgatacagaaaca
gacagtttagatacacaggaagctcgccttgtcgggatgtcttttgctatcgaagcgggt
catgctgcttacctaccactcggccatgattatcttgatgcgcctgtgcaattgcccctc
gatgaagtgattgcattgatgaaacctattcttgagaatgaaaaaatccttaaagtaggc
caaaacttaaaatatgatgctgaagtacttgaaaattatggtattgaactgaaaggtatt
gcctttgataccatgttggaatcgtatgtgctcaatagcgttgcgggcatggggcgccat
gatatggacagccttgcagaccgccatctcaaccataaaacagtcagttttgaagaaatt
gcaggcaaaggtaaaaagcagctaacgtttaatcaaatcgcattagaagaagcggcaaat
tatgccgcggaagatgcggatgttacgttacttttgcatcaagcactttatcctcaatta
gaagcagaaccaaagcttgcgcatatatttcataatattgaaataccgctagtacccgta
ttggtcagaatggaacgtaaaggggtgcttattgatgcctctgttttagcggcacaatca
aagatcattactgcacgtttagctgaacttgaaaaagaagcgtttgagctggcaggagaa
gaatttaaccttgcttcgccaaaacagttgcaggtcattttatttgagaaactgcaatta
cctattattaagaaaacgccaagtggtgcggcttcaaccaatgaagaagtgttggaagaa
ctcgcgcttaatcatgcgctaccgaaattattacttgaacatcgcagcctagcaaaactg
aaatcgacttatacggataagttacccttaatgataagcccaagaacacagcgtgttcat
acttcttatcatcaagcggtaacggcgacagggcgtttatcatctcgtgatcctaactta
caaaatatcccagtaagaaccgaagaagggcgtcgaattcgccaggcatttattgctcgt
aagggttataaagtgatggcggcggactactcgcaaatcgaattacgcattatggcgcat
ttatcacaagataaaggccttttaaccgcttttgctgaaggcaaagatattcataaagcg
actgcggcagaggtatttggtgttgcgcttgaggatgttaccaacgatcaacgtcgtagt
gcgaaagcgattaactttggtttgatatatggtatgagcgcttttggtcttgcgcgtcag
ttaggcattcctcgaggtgaagcacaacgttatatggatctctactttgagcgctatccc
ggtgtattgcgttatatggaaaacacccgtttacaagcatcagagcaaggctatgttgaa
accttagaaggccgtcgactctacttagcagatattaatgcgagtaatgggatgcgccga
aaagccgctgaacgtgaagcgattaatgcgccaatgcaaggcacagccgcagatattatc
aagaaagccatgattgcggttgacgaatggttgcaaacggaaaaacctaatgcagatatg
ctcatgcaagtgcacgatgaattggtgtttgaggttaaagaatctgagcttgagcatgtg
caggaaaaagtacaagcattgatggagcaaagcatgactctcgatgtgccattgaaggtg
gatgttggggtgggtgataattgggatgaagcccactag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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