KEGG T05509: NCTC12003

Providencia heimbachae: NCTC12003_00416

Entry

NCTC12003_00416   CDS       T05509

Symbol

hupA

Name

(GenBank) NS2

K05787

DNA-binding protein HU-alpha

Organism

phei Providencia heimbachae

Brite

KEGG Orthology (KO) [BR:phei00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:phei03032]
    NCTC12003_00416 (hupA)
   03036 Chromosome and associated proteins [BR:phei03036]
    NCTC12003_00416 (hupA)
   03400 DNA repair and recombination proteins [BR:phei03400]
    NCTC12003_00416 (hupA)
DNA replication proteins [BR:phei03032]
Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    NCTC12003_00416 (hupA)
Chromosome and associated proteins [BR:phei03036]
Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    NCTC12003_00416 (hupA)
DNA repair and recombination proteins [BR:phei03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      NCTC12003_00416 (hupA)

SSDB

Motif

Pfam:

Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-CCDC81_euk_1 NA37 DUF2267 VWA_3 Trp_ring

Other DBs

NCBI-ProteinID:

SQH11750

Position

1:467046..467318

AA seq 90 aa
MNKTELVEAIAESADLSKVQAKAALEATLNAITETLKNGEQVQLVGFGTFKVNQRAERTG
RNPQTKAEILIPATTVPAFTAGKSLKEAVK

NT seq 273 nt +upstreamnt +downstreamnt
atgaataagactgaattagttgaagctatcgccgaatcagcagacctgagcaaagttcag
gcaaaagcagcattagaagctactttaaatgctatcactgaaacgctgaaaaatggcgaa
caagtacaactggtcggtttcggtacttttaaagttaaccaacgtgcagaacgtaccggt
cgtaacccacaaactaaagcagaaattttaattcctgctacaactgtacctgcgttcact
gctggtaagtctttgaaagaagcagtaaaataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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