KEGG   Providencia heimbachae: NCTC12003_00956
Entry
NCTC12003_00956   CDS       T05509                                 
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor rpoS
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
phei  Providencia heimbachae
Brite
KEGG Orthology (KO) [BR:phei00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:phei03021]
    NCTC12003_00956 (rpoS)
Transcription machinery [BR:phei03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     NCTC12003_00956 (rpoS)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r3 Sigma70_r4 Sigma70_r1_2
Other DBs
NCBI-ProteinID: SQH12266
Position
1:1076085..1077071
AA seq 328 aa
MSQSSLKVNELYNDLDESSSDDAFDESQFKEEDLVSELEDEMDLLQSTTARVLDATQIYL
SEIGFSPLLTAEEEVFYSRRALRGDIPSRQRMIESNLRLVVKISRRYNNRGLALLDLIEE
GNLGLIRAVEKFDPEKGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNIYLRTA
RELAQKLDHEPSPEEIALKLDKPVEDVSRMLRLNERITSVDTPIAGDSEKSLLEVLSDEN
DSGPENTIQDNDLKDNIVKWLFELNPKQREVLARRFGLLGYEAETLEEVGREIGLTRERV
RQIQVEGLRRLKDILHNEDLTLESLFNM
NT seq 987 nt   +upstreamnt  +downstreamnt
atgagccaaagttcgctgaaagttaacgagttatataatgaccttgatgaaagtagttcg
gatgatgcttttgatgaaagtcagtttaaagaagaggatctagtttcagaactcgaagat
gaaatggatttactccagagcaccactgcgcgtgttctggatgctacccaaatttatctc
agtgaaattggattctcaccgctcctaacagccgaggaagaggttttctattctcgtagg
gctttacgcggtgatattccatcacgtcagcgtatgattgaaagcaacctccgtctggtt
gtaaaaatatctcgtcgttataataaccgaggactcgccttactcgatttgattgaagaa
ggtaatcttgggttgattcgtgcagttgaaaaattcgatccagaaaaaggatttcgtttt
tcaacctatgccacttggtggatccgtcaaacgatcgagcgagccatcatgaatcaaacc
agaacgattcgccttcctattcatattgtaaaagaactcaatatttaccttcgtacggca
cgtgaattagcgcagaagctcgatcatgagccaagccctgaagaaattgccctaaaatta
gataaacctgttgaagacgttagtcgaatgctacgtttaaatgaacgtattacttcggtg
gatacgccgattgcgggggattcagaaaagtctttacttgaagtactctctgatgaaaat
gattcagggccagaaaatacaattcaagataatgacttaaaagataacattgttaagtgg
ttatttgaactgaatccaaaacaacgcgaagtcttagcgcgtcgttttgggcttttaggc
tatgaagcagaaactctagaagaggttgggcgcgaaattgggctcactcgtgaaagagtt
cgccagattcaagtagaaggtttgagacgtctcaaagatattttacataatgaagattta
acgttggaatcgttattcaatatgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (10)   

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