KEGG   Providencia heimbachae: NCTC12003_03085
Entry
NCTC12003_03085   CDS       T05509                                 
Symbol
recD_2
Name
(GenBank) Exodeoxyribonuclease V alpha chain
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
phei  Providencia heimbachae
Pathway
phei03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:phei00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    NCTC12003_03085 (recD_2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:phei03400]
    NCTC12003_03085 (recD_2)
Enzymes [BR:phei01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     NCTC12003_03085 (recD_2)
DNA repair and recombination proteins [BR:phei03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     NCTC12003_03085 (recD_2)
SSDB
Motif
Pfam: AAA_19 AAA_30 RecD_N UvrD_C_2 Helicase_RecD SH3_13 Viral_helicase1 AAA_11 AAA_22 SLFN-g3_helicase UvrD-helicase nSTAND3 AAA_16 DEAD MukB T2SSE UvrD_C AAA_28 PhoH AAA AAA_14 NTPase_1 CbiA
Other DBs
NCBI-ProteinID: SQH14412
Position
1:complement(3363364..3365229)
AA seq 621 aa
MMKALFNQGIEFRLFTPLDVQFAYSIAGEDNPILLMVSALLSAETMSGNVCLALSDITVD
KLFSGRHPELAVSFWQIMGNPDEETIYQVINSAEPVSLATGHEISPLILSGDYLYFQRMW
QYEQSVANYFSHSTISYQNDEDTQFILNELFPKSDEIDWQKIAAAVTVTSKVSIISGGPG
TGKTTTVARILAALIKLESKTKHHLRVELAAPTGKAAARLTESLSMAMQQIPLTESERKL
LPNQAKTLHRLLGAQPESQQFRYHRDNPLVLDILIVDEASMVDLPMMGKLIEALPTDARL
IFLGDKDQLASVEAGAVLGDICQFANLGYSSERAAQLAKLTGQSLANFTGNNGPRIRDSL
CLLRKSYRFSAQSGIGQLATAVNDGNTKLSLRLLSEPLTDIHNHMINNVLDTQDDYGQIL
LDASKHYQDYLLAVKSAKTPEEILSKFNQYRVLTALRDGPYGVVGLNDKLERLLHRQGLI
HRPFNKLNKHYSGRPIMISRNDSPLGLFNGDIGIILADEENALRAYFQFPDGTIRGIQPN
RLPLHETAYVMTVHKSQGSEFAHTAFVLPTVYSPVITRELVYTAITRAKKELSLYGCPKI
LRRAIEMPTKRRSGLTLQLLD
NT seq 1866 nt   +upstreamnt  +downstreamnt
atgatgaaagcactttttaatcaagggattgagtttcgattgtttacgccactagatgtt
cagtttgcttatagcattgcaggtgaagataatcctattttattaatggtttcggcatta
ttaagtgccgagactatgtcgggtaatgtttgcctcgcattatcggatattactgtcgat
aaattattttcagggagacatcctgagctggctgtaagtttttggcagataatgggaaac
cctgacgaagaaacaatttatcaagttattaatagtgctgagcctgtttccttggccact
ggacatgaaatttcaccgttgatcctctctggtgactatttatattttcaacgcatgtgg
caatacgaacaaagtgttgctaactatttttcgcattcgacgatcagttatcaaaatgat
gaagatactcagtttattttaaatgaattgttccctaaaagtgatgaaattgattggcag
aaaattgcggcggcagtcacggtaacaagtaaagtttcgattatttcaggcggtccggga
accggtaaaacgaccacagtcgcccggatattggcggcattaattaagctagaaagtaaa
actaagcatcatcttcgggttgaattagccgctcctacagggaaagccgctgcaaggtta
accgagtcattgagcatggcgatgcagcagatccctttgactgagagtgagcgtaagctg
ttacctaatcaagcaaaaacacttcatcgcttgttgggcgctcaacctgaaagccagcaa
tttcgttatcatcgggataatccgctcgttttggatattttaattgtagatgaagcctct
atggttgatttacccatgatgggcaaactaattgaggcgctacccaccgatgcccgcttg
atttttcttggtgataaggatcagcttgcttctgttgaagctggagcagtgcttggtgac
atatgtcaatttgctaatttagggtacagctcagaacgggcagcacagctcgctaaatta
acggggcagagtttggctaattttactgggaataatggcccaagaattcgagatagccta
tgtttattgaggaaaagttaccgtttctccgctcaatcagggattggtcaattagcgacg
gcagtaaatgatggaaatacaaaactttcattgagattacttagcgagcctttaactgat
atccataaccatatgatcaataatgttctggatactcaggatgattatggtcaaatacta
ctcgatgcatcaaagcactaccaagattacttgttagcggttaaatcagctaaaactccc
gaagaaattttaagtaaattcaatcagtatcgcgtattaactgcattgagggatgggcct
tatggtgttgttgggctcaatgataaattagagagattacttcatcggcaagggttaatt
catcgtccatttaataaattgaacaaacattattcgggacgcccgattatgatcagccgt
aatgatagcccattaggactatttaatggggatattggtattatattagcggatgaagaa
aatgctttaagagcctactttcaattccctgatgggacaattcgtgggatacaaccaaat
cgtctaccattgcatgaaactgcctatgtgatgacagtgcataaatctcaaggttcggag
tttgctcataccgcatttgttttaccaacggtatattctcctgtgattactcgggagctt
gtctataccgcgattactagagctaaaaaagagttatctctttatggctgcccgaaaatt
ttgcgccgtgcaattgaaatgccgacaaaaagacgtagtggcctaactttgcagctattg
gactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (23)   
   Pfam (23)   
All databases (32)   

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