KEGG   Pseudonocardia sp. HH130630-07: AFB00_00285
Entry
AFB00_00285       CDS       T04486                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
phh  Pseudonocardia sp. HH130630-07
Brite
KEGG Orthology (KO) [BR:phh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:phh03016]
    AFB00_00285
Enzymes [BR:phh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     AFB00_00285
Transfer RNA biogenesis [BR:phh03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    AFB00_00285
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: ANY05024
UniProt: A0A1B1ZH04
Position
57577..58839
AA seq 420 aa
MNRGAGTTGGTEFRSPGDPSPDGSPDPVPLLSPADGLPPITATAADLATVATAVAGGTGP
VAVDAERASGFRYSQRAYLVQLRRAGAGTALIDPIPLHGDLGPLVTALDGPEWVLHAASQ
DLTCLAELDLRPAALFDTELAGRLAGLPRVGLGPMVENLLGLSLEKGHGAADWSRRPLPE
DWLVYAALDVEVLVELRDVLSGLLHEQGKLEWARQEFEAVRTAPPAAPRAEPWRRTSGIH
KVRRPRPLATVRELWQARDALAVERDIAPGRVLPDAAIVDAAVRNPDSADALVALPVYRG
RAQRRLAGYWFDAVRRAAALPESELPRGSAPTDGPPPVSRWADRDPDAAARLTNARAALA
GVSEQHDVPVENLLQPDLLRRLCWSPPTDGDVRGALAAGGARPWQIELLAPLLEPVLDRG
NT seq 1263 nt   +upstreamnt  +downstreamnt
ctgaatcggggagcggggacgacaggcggcacggagttccggtcgcccggtgatccgtcc
ccggacggttcacccgatccggtacccctgctgagcccggccgacggtctgccgccgatc
acggcgaccgcggctgatctcgccacggtggccaccgccgtcgccggcggtaccggcccg
gtggccgtcgacgccgagcgtgcctcgggtttccgctactcccagcgtgcctacctggtc
cagctccgccgggccggggccgggaccgccctgatcgacccgatcccgctgcacggcgac
ctcggtccgctggtgacggcgctggacggcccggagtgggtgctgcacgccgcgtcccag
gacctgacctgcctcgccgagctggacctgcggccagcggcgttgttcgacaccgagctg
gcggggcggctggccggtctcccccgggtcggcctcgggccgatggtggagaacctgctg
gggctgtccctggagaaggggcacggcgccgccgactggtcgcgccgcccgctgcccgag
gactggctggtctacgccgcgctcgacgtcgaggtactcgtcgagctccgcgacgtgctg
agcgggctgctccacgagcagggcaagctggagtgggcccggcaggagttcgaggccgtc
cggacggcaccgccggcggcaccgcgcgccgagccgtggcggcgcacctcgggcatccac
aaggtccgcaggccccggccgctcgccaccgtgcgggagctgtggcaggcgcgcgacgcg
ctggccgtcgagcgcgacatcgcacccggccgggtgctgcccgacgccgcgatcgtcgac
gccgccgtccgcaacccggactcggcggacgcgctcgtcgcgctgccggtctaccgcggc
cgtgcgcagcggcggctggccggttactggttcgacgcggtccgccgggccgccgcgctg
cccgagtccgaactgccgcgcgggtcggcaccgaccgacggcccgcccccggtgtcgcgc
tgggccgaccgggacccggacgccgccgcccggctcacgaacgcccgggccgcactcgcg
ggggtctccgagcagcacgacgtgccggtggagaacctcctgcagcccgacctgctgcgc
cggctgtgctggtccccgcccaccgacggcgacgtgcgcggcgcactggccgccggcggc
gcccggccgtggcagatcgaactcctcgccccgctgctggaaccggtgctcgaccgcggc
tga

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