KEGG   Pseudonocardia sp. HH130630-07: AFB00_17440
Entry
AFB00_17440       CDS       T04486                                 
Name
(GenBank) hypothetical protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
phh  Pseudonocardia sp. HH130630-07
Pathway
phh03030  DNA replication
phh03430  Mismatch repair
phh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:phh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AFB00_17440
   03430 Mismatch repair
    AFB00_17440
   03440 Homologous recombination
    AFB00_17440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:phh03032]
    AFB00_17440
   03400 DNA repair and recombination proteins [BR:phh03400]
    AFB00_17440
Enzymes [BR:phh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AFB00_17440
DNA replication proteins [BR:phh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AFB00_17440
DNA repair and recombination proteins [BR:phh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AFB00_17440
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: ANY07783
UniProt: A0A1B1ZPT5
Position
3659585..3660271
AA seq 228 aa
MGRLTATLTDITIAVIDFEYTTPTGAAPEPIEVAVQTLRVEDGRLRRAWAYEALIRPPAH
APVTGFDTQQTGITAAMVADRPAAAEVLAELDDQLRSATNGGAAAAGVGPAAGGPLVLVA
HHAHAEARILSDWREHCPTLARTDLIDTVRLARDRFPELPKHGLDVLAAHMRMPAPPGRH
RAMPDVQLLVDVFCSLVEHEVRWPDLRTLRAVANVPARAADTEQEALF
NT seq 687 nt   +upstreamnt  +downstreamnt
atgggccgtctgaccgccactctcaccgacatcaccattgcggtgatcgacttcgagtac
accaccccgaccggagccgcccccgaaccgatcgaggtcgccgtgcagaccctgcgcgtc
gaggacggtcggttgcgccgtgcctgggcctatgaggccctgatccggccgcccgcgcac
gcgcccgtaacagggttcgacacccagcagaccggcatcacggcggcgatggtcgccgac
cgtcccgccgcggccgaggtgctcgccgagctggacgaccagctgcgatcagcgacgaac
gggggcgccgccgcggctggggtggggccggccgcgggaggcccactcgtcctcgtggcc
caccacgcccacgccgaagcgcggatcctcagcgactggcgcgagcactgcccgacactg
gcccggaccgacctgatcgacaccgtccgtctggctcgcgaccggttccccgagctgccc
aagcacggtctcgacgtgctggccgcgcacatgcgtatgccggccccgcctgggcggcac
cgcgcgatgcccgacgtgcagctgctcgtcgacgtcttctgctccctggtcgagcacgag
gtccgctggcctgacctgcgcacgctgcgagcggtcgccaacgtgcccgcccgcgccgca
gacaccgagcaggaagcgctgttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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