KEGG   Pseudopodoces humilis (Tibetan ground-tit): 102104952
Entry
102104952         CDS       T02921                                 
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
  KO
K05222  transient receptor potential cation channel subfamily V member 1
Organism
phi  Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:phi00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    102104952 (TRPV1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:phi04040]
    102104952 (TRPV1)
Ion channels [BR:phi04040]
 Voltage-gated cation channels
  Transient receptor potential channel (TRP)
   102104952 (TRPV1)
SSDB
Motif
Pfam: Ank_2 Ank Ion_trans Ank_3 Ank_5 Ank_4 PKD_channel CNOT1_HEAT
Other DBs
NCBI-GeneID: 102104952
NCBI-ProteinID: XP_005525785
Position
Unknown
AA seq 844 aa
MSSILGKMKKFGSFDMEESEVTDEHVDGEDSVQETPDNPQGPLSTKVQPPKSNIFARRGR
FVMGDSDKDMAPMDSFCQMDHLMAPSVIKFHVNLERGKLHKLLSTDSITGCSEKAFKFYD
RRRIFDAVAQGNTKDLSDLLLYLNRTFKHLTDEEFKEPETGKTCLLKAMLNLHDGKNDTI
PLLLDIARKTGTLKEFVNAEYTDNYYKGQTALHIAIERRNMYLVKLLVQNGADVHARACG
EFFRKIKGKSGFYFGELPLSLAACTNQLCIVKFLLENPYQAANITAEDSMGNMVLHTLVE
IADNTKDNTKFVTKMYNNILILGAKINPILKLEELTNKKGLTPLTLAAKTGKIGIFAYIL
RREIKDPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEILAYSSETPNRHEMLL
VEPLNRLLQDKWDRFVKHLFYFNFFVYTMHITILTAAAYYRPVQKNEKPPFTFGYSTGEY
FRVAGEILSVLGGLYFFLRGIQYFVQRRPSLRTLIVDGYSEVLFFVHSLLLLSSVVLYFC
GQELYVASMVFSLALGWANMLYYTRGFQQMGIYSVMIAKMILRDLCRFMFVYLVFLLGFS
TAVVTLIEDDNEGQDTNISDYARCCHTKRGRTSYNSLYYTCLELFKFTIGMGDLEFTENY
RFKSVFVILLVLYVILTYILLLNMLIALMGETVNKIAQESKSIWKLQRAITILDIENSYL
NCLRHSFRSGKQVLVGITPDGQDDYRWCFRVDEVNWSTWNTNLGIINEDPGYSGDLRRNP
SFSIKPGRVSGKHWKTLVPLLKDGEKRREEPHKLPEEVKLKPVLEPFFEPEDSEVLKESI
PKSV
NT seq 2535 nt   +upstreamnt  +downstreamnt
atgtcctccattcttgggaagatgaagaagtttggcagttttgacatggaggaatctgaa
gtgacagatgaacacgtggatggggaggactctgtccaggaaacccctgacaacccccag
ggcccactcagcaccaaggtgcaaccacccaaaagcaacatttttgcaagacggggccgc
tttgtgatgggggacagtgacaaggacatggctcccatggactccttctgccagatggat
cacctgatggcaccttctgtcatcaaattccatgtgaatttggagaggggcaaacttcac
aagctcctatctacagattccatcacaggctgctcagaaaaagctttcaaattttatgac
cgcagaaggatctttgatgctgtagcccaaggcaacacaaaagacctcagtgacctgcta
ctctaccttaatagaaccttcaagcatctcacagatgaggagttcaaagagcctgaaact
ggcaaaacctgtttactgaaagccatgctgaatctacatgatgggaaaaatgataccatt
cccttgctgctggatattgcaaggaaaactggaactctgaaagagtttgttaatgcagaa
tatactgacaactactacaagggccagactgctcttcacatcgccatcgagaggaggaac
atgtacctggtgaagctcttggtccagaatggagcagatgttcatgccagagcctgtggg
gagttcttcaggaaaatcaaagggaaatctggcttttattttggagagcttcctttgtcc
ctggctgcctgtaccaaccagctctgcattgtgaaattcctcctggagaatccctaccag
gcagccaacatcactgctgaggactccatgggcaacatggtcctgcacacactggtggag
attgcagataacacaaaggataacaccaagtttgtaaccaagatgtataataacatattg
atccttggtgccaaaattaatcccatcctcaagctggaagagctcaccaacaagaaaggg
ctgactcctttaactctggcagccaaaacagggaagatagggattttcgcttacatcctc
agacgggagatcaaagaccctgagtgcagacacttgtccaggaagttcactgaatgggcc
tatggacctgtccactcctctctttatgacctgtcctgtatagacacctgtgagaaaaat
tcagtgcttgagatccttgcctacagcagtgagacaccaaaccgtcatgagatgctgctg
gtggaaccccttaacaggctgctgcaagacaagtgggaccggtttgtcaagcacttgttt
tacttcaacttctttgtctacaccatgcacatcaccatcctcactgcagctgcttactac
agacctgtacagaagaatgaaaagcctcccttcacctttggttacagcactggggaatat
tttcgagtagctggagagatcctgagtgtactgggaggcctatatttttttttaagaggg
atccagtatttcgtgcagaggcgcccatcactcaggacactgatagttgatggctacagt
gaggttcttttctttgtccactccctgctcctgctgagctctgtggtgctgtacttctgt
ggccaggagctctatgtggcttccatggtgttctccttggccctgggctgggccaacatg
ctctactacacccggggcttccagcagatgggaatctactctgtcatgatcgccaagatg
attcttagagatttatgtcgcttcatgtttgtctatcttgtatttctcttgggattttct
acagctgtggtgactttgattgaagatgacaacgaggggcaggacacaaatatctctgac
tatgcccggtgctgccacacaaaacgaggccgcacctcctacaacagcctctactacacc
tgcctggagctcttcaagtttaccattggcatgggggacctggagttcacagagaactac
aggttcaagtctgtgtttgtcatcctgctggtgctctatgtcatcctcacctacatcctc
ctgctcaacatgctcattgcactgatgggggagactgtcaacaaaattgcacaggagagc
aagagcatctggaagctccagagagccatcacaatcctggacattgagaacagctacctg
aactgcctgaggcactcgttccgctctgggaagcaagtcttggtggggatcacacctgat
ggccaagatgattacagatggtgcttcagggttgatgaagtgaactggtccacgtggaac
actaacctgggcataatcaacgaagaccctgggtactctggggacctcagacgaaatccc
agtttctccattaagcctggcagagtttcagggaagcactggaaaacattggttccactt
ctaaaagatggagagaagaggagagaagagcctcacaagctgccagaagaagtcaaatta
aaacctgttttggaacctttttttgagccagaagattctgaggtgttgaaagaatcaatt
ccaaagtcagtctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (32)   

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