KEGG   Pseudopodoces humilis (Tibetan ground-tit): 102105472
Entry
102105472         CDS       T02921                                 
Symbol
RNF6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6 isoform X1
  KO
K22753  E3 ubiquitin-protein ligase RNF6 [EC:2.3.2.27]
Organism
phi  Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:phi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:phi04121]
    102105472 (RNF6)
Enzymes [BR:phi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102105472 (RNF6)
Ubiquitin system [BR:phi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    102105472 (RNF6)
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-C3HC4_2 zf-C3HC4 zf-RING_11 zf-ANAPC11 zf-RING_5 zf-C3HC4_3 zf-RING_UBOX zf-RING_4 zf-HC5HC2H_2 Prok-RING_4 zf-HC5HC2H zf-RING-like
Other DBs
NCBI-GeneID: 102105472
NCBI-ProteinID: XP_005516330
Position
Unknown
AA seq 685 aa
MDPTKNIRKFGIIVMDRFRHRAGNGNEQAPSRERSHGEGERQRQLERLSREEAYYQFINE
LNEEDYRLMRDRNLLGTPGEITAEELQQRLEGAKERLTSQSDLDNREGEGRTVGDSEVLR
ENSNGDSLLEWLNTFRRTGNATRSGQSGNQTWRAVSRTNPNSGEFRFSLEININHDNNSS
ETSGEENVDIDATRLYVERRRQLVASSVAPRTRSMAAREANNEAARTRLLRRAMALRSEI
VSHAVSERLRSRTRELTGQTNNTTRNNSVAAGEPREMPERGNSARVRRGRARANVQMNTN
QRLEILRLRSTLSSRSRSPLQRQGDAAPSEERGQGQDRNAQQVNRSRRQTAQASPQPTEE
QARENTQTPQLSSVAPSLGITLEEEESSRPVAAVRRHPTITLDLQVRRIRPGENRDRDSI
ASRTRSRAGMSENTVTFESDSGGFRRTISRSERAGIRTYISTIRIPLRRISETGLGEPSS
VALRSILRQIMTGFGELSSLMETESNSEVQRGGHHSADAQNNSSSANSSDPSGILSRNGN
AVDSSRERNGQRGGSQRSGRNRESQDSRQSQDANSLVENGTLPILRLAHFFLLNEDDDDD
DRLRGLTKEQIDNLSTRNYGDVHTENEWSKTCSVCINEYATGNKLRQLPCTHEFHIHCID
RWLSENSTCPICRQPVLGSNATDNG
NT seq 2058 nt   +upstreamnt  +downstreamnt
atggatcccacgaagaacataagaaagtttggcattatcgttatggatcgcttccgacac
cgtgcaggaaatggcaatgagcaggcgccttcacgagagcgcagccacggcgaaggcgag
agacagcggcagctggagcgcctcagcagggaggaggcctattaccagttcattaacgag
ctcaacgaggaggactacaggttaatgagggaccgaaacctgcttggcactcctggagaa
ataacagcagaagagttgcagcagcgtttggagggggctaaggagcgtctgacatcacag
tctgatctggataacagagaaggtgaaggtagaactgttggagattctgaagttctcagg
gaaaactccaacggtgactctttgcttgaatggcttaacacatttcgtcgcacaggaaat
gccactcgcagtggacagagtgggaaccaaacctggagagctgtgagtcgaacgaatcca
aacagtggggagtttcgctttagtcttgagatcaatataaatcatgataataacagttct
gaaacttccggcgaggagaatgttgatatagatgctaccagactgtacgtagaaagaaga
cgtcagctagttgccagttcagtagccccacggacgaggagcatggctgcaagagaggca
aacaacgaagctgcaaggaccaggcttttaaggcgtgccatggcattaaggtcagaaata
gtctctcacgcagtttcagagaggctcaggagtagaacgagggagctgacaggccagaca
aataatactacacgaaataattctgtggctgctggtgaaccaagagaaatgccagaaaga
ggtaattctgcaagagtcagaaggggtagagctagagctaatgtccagatgaatacaaac
caaagactagaaattttgcggctgaggtctaccttaagtagtcgaagccgctccccgctg
caaaggcaaggtgatgctgctccttctgaggaacgtggtcaggggcaggatagaaatgca
cagcaagtcaacagaagtaggagacaaacagctcaggcttctccacagcctactgaagag
caagcaagagaaaacactcagactccccagctttccagtgtagcgccatccttaggaata
actttggaagaggaagaatctagtaggccagtagctgctgtcagaaggcacccaacaatt
acactagatcttcaggtgagaagaattcgtcctggagaaaacagagaccgggacagcatt
gccagtagaactcgttctagagcaggaatgtcagaaaacacggttacctttgaaagtgac
agtgggggatttcggcgcacgatatcccgatcagaacgcgccggtattcggacctacatt
agcactatacggatacctcttcgtcggatttcagaaactgggcttggggagccttcatca
gtggctcttcgatcaatccttagacagataatgacaggctttggagaactgagttcttta
atggaaactgaatctaattcagaagtgcaaagaggcggtcatcactcagcagatgcacag
aataactcaagttcagcaaacagcagtgatccaagtgggattttgtctagaaatggaaat
gcagtagacagcagcagggaaagaaatgggcagaggggtggtagtcaacgttctgggcgc
aatcgtgagagccaagatagcaggcagtctcaagatgcaaacagcctggtggagaacgga
acactgcccatccttcgacttgcccacttcttcctgctgaatgaagatgatgatgatgat
gatcgtttgagaggtttaaccaaagagcagattgacaatctttctacacggaactatggg
gatgttcacactgaaaatgaatggagtaaaacatgcagtgtttgcattaatgaatatgca
acagggaataaactaaggcagttaccttgtacacatgagtttcatattcattgtattgac
cgctggctttctgaaaactccacttgcccaatttgtcggcagccagttctggggtctaat
gccacagataatggctag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (14)   
   Pfam (14)   
All databases (49)   

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