KEGG   Pseudopodoces humilis (Tibetan ground-tit): 102107846
Entry
102107846         CDS       T02921                                 
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X5
  KO
K14438  chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
phi  Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:phi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:phi03036]
    102107846 (CHD9)
Chromosome and associated proteins [BR:phi03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    102107846 (CHD9)
SSDB
Motif
Pfam: SNF2-rel_dom BRK Helicase_C Chromo ResIII DEAD HDA2-3 Myb_DNA-bind_7
Other DBs
NCBI-GeneID: 102107846
NCBI-ProteinID: XP_005526416
Position
Unknown
AA seq 2874 aa
MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQDAQ
NQQKMSEFDQLNQYDSLKLHSVNQSFNSSADNVLSPHSQFNCSPVHPQNQSNGMFPDVAD
GSPMWGHQTATTVSDQNGSPFHQGHSQSMQQNKSFVAHHDFALFQANEPQHQCASLRPQQ
SRNNTGQDALSQPKDFMEVNVSTSLRVSVNHPPSVSNPSTSQQPLSVQQFSQNASASIHF
CGNQEGNFDGQSPTITPCSVSNSQQFSSPYSYSNNRISPTSLLQPTTALSTSQQTHSISD
FTGSDAFTSQTGTKQETTEHMLNPNTPLNSSTFQMLHSAHPQGNFSSSKLSPVNINFSAS
TSSASQISHFTDPIESNGFTSLDDNLLHQVETHSEPFTGLDPDDLLQEDLLPQFDDSAFV
QDSTTHVLEHDLEHHITPQQVTPSSELVRAPSQTQIHPWHSSVSNQHLQGRSRASLQGQP
PSKKTDGSGSYTKLQNTQVKAMSEKKKKKTDSESKQEKANRIISEAIAKAKERGERNIPR
VMSPENFPSVSAEGKEEKKGRKVKSKPKDKESKKPKTGSSSKIKEKTKIGKLIITLGKKQ
KRKNESSDELSDAKQTPQRPLKDEDSQKRRSNRQVKRKKYAEEGEGKQSEEEAAKVSVKI
KKNSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRVIKKEVSAGMTVDTEEFFVKYKNYS
YLHCEWATEQQLLKDKRIQQKIKRFKVRKAQRAHFFADMEEEPFNPDYVEVDRVLEVSLC
EDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPPNS
WKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILL
TGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIVR
GTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLL
TGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKE
DVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCC
NHPYLIKGAEEKILGEFKETYSPSAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIF
SQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLG
INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKL
GLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQ
RRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNSLV
IDTPRIRKQTRPFSATKDELAELSEVESECDEKPKLRRPCDRSNGYGRTECFRVEKNLLV
YGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQ
TRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKHHC
NKVLLRVRMLYYLKQEVIGNEFQKVFDGTDASEIDVWVPEPDHSEVPAEWWDADADKSLL
IGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVEDPEYKPAPALF
KDDIEDDVSSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQQM
QPTFPVQTSMMQLPYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPERGRF
DWTKFRAMARLHKKTDESLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQPITEERASRT
LYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRTDY
HILRDPELSFMSAQRNYNQNKVALSRTSTPLLHQYQMALSASPLTPQSRLSDAKVNAFED
AKAKNENLKEDPQSSEEESMSTEETQTVLKSETLSPKNGTPIQITDHRPSVKAETDRRMV
AARTEPLTPNPASKKQRVSKRGSDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSQSRSGS
SSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSDEEEAQKREGTPHIKAYDEESVASL
STTQDETQDSFQMNNGTPNSGYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWPSA
RRSYDSTAVASFYTTKLLDSSGAAAEYSEPSAPTPPLAAVKEEYDQSPQLSKEGGLKLTF
QKQGLSQKRPFESEEGALGQQQYLARLRELQNASETSLVNFPKSLPKSGTSSHLTASANG
VIVDSQPVVKKRRGRRKNVEGVDVLFMNRNKQPNHVNPGINSCQVAAGINPALTYTQSQG
MLDAESPVPVINLKDGTRLAGDDAPKRKDLERWLKEHPGYVEDSGACIPRMQLHDGRPKQ
KRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPLKDLCRFLKENPEYGVAPEW
GEVVKQSGFLPEGMFDRILTGPVVREEVSRRGRRPKSEIAKATAAAAAASAASVPVSPLL
ANGLLPGVDLPSLQALQQNLQNLQSLQVTAGLMGMPAGLAAGGEAKNVAAMFPMLLSGMA
GLPNLLGMGGLLTKSTESVLEEKKGNESKDTDTKKERTEDQNTDTGGENSVSSSPSTSSA
AAAANPLSLNPLLLSNILYPGMLLTPGLNLHIPALSQSNIFDVQNSESNDTGSAKPTEEK
EENSRVRDQEDKGGTEPSSHNENSTDEGSEKADASSGSDSTSSSSEDSDSSDED
NT seq 8625 nt   +upstreamnt  +downstreamnt
atgactgatcctatgatggatttttttgatgatgccaatctttttagtgagaccttagaa
ggtttgtcagatgatgcctttgttcaacctggacctgtttcacttgttgatgaattgaat
ttgggtgcagaatttgaacctttgcacatagactcactgaaccatgtgcaagatgctcaa
aatcaacaaaagatgagtgagtttgatcagctgaatcagtatgattcactgaagcttcac
tcagtaaatcagtcttttaatagctcagctgacaatgtcttatcaccacactctcaattc
aattgttcaccagttcatccgcaaaaccagtccaatgggatgtttccagatgtggctgat
ggtagtcctatgtggggtcatcaaactgccacaactgtttcagatcaaaatgggtcccct
tttcaccaaggacattctcagtctatgcagcaaaacaaaagctttgtagcacaccatgac
tttgccttatttcaggctaatgaaccacagcatcagtgtgcctcactacggccgcagcag
agcaggaacaacacggggcaggatgctctgagtcagccaaaagacttcatggaagttaac
gtgtctacttccctcagagtcagtgttaaccacccaccttcagtttctaatccatcgact
tcacagcagcctctgtccgttcaacagttttctcaaaatgcaagtgcttcaatacatttt
tgtgggaatcaagaaggaaattttgatggacagtccccaactattactccatgttctgtc
agtaatagtcaacaattttcatctccgtattcctactctaataaccgcatttctcctacc
agccttcttcagcctacaacagctctttctactagccagcagacacactctatctccgat
ttcactggaagcgatgcctttacatctcaaacagggaccaagcaagaaacaactgagcac
atgttgaatcctaatacacctttgaattcaagtacttttcaaatgttgcattctgcgcat
cctcagggcaactttagtagttcaaaactctctcctgtgaatattaatttttcagcttcc
actagttctgcttctcagataagccatttcaccgaccctattgaaagcaatggttttaca
tctttagatgataacttacttcatcaagtggagactcacagtgaaccattcacaggactt
gacccggatgacctcctgcaggaagaccttctgccacagttcgatgactctgcatttgtt
caggatagcacaacccatgttttagagcatgacctagaacaccacataaccccacagcaa
gtgacaccgtcatctgaactcgttcgggcaccgtctcaaactcagatccatccttggcat
tcttcagtttctaatcagcacctgcaaggcagaagtcgtgcatccttacaagggcagcct
ccttccaagaagactgatggttcaggatcatatactaagttgcagaatacccaggtgaag
gcaatgtctgaaaagaagaagaaaaaaacggactcagaaagtaagcaagagaaggcaaat
cgcataatatctgaagcaattgcaaaggcaaaagagagaggagagagaaacattccacga
gtaatgagccctgaaaacttccccagtgtttcagctgaaggaaaagaggaaaagaagggt
agaaaagttaaatccaaaccaaaggataaggagagcaaaaagccgaaaactggttcctca
tccaaaattaaagagaagacaaaaattggaaagctgatcatcacactgggcaaaaagcag
aaaaggaaaaacgagtcttcagatgaattgtctgatgctaagcagactccacagcggcca
ctgaaagatgaagactcacagaagagaagatcaaatcggcaagttaaaaggaaaaaatat
gctgaagaaggggaagggaaacaatcagaagaggaagcagctaaagtttctgttaaaatc
aaaaagaattctgcccctttacctgctgaacagcctttacaattatttgtggaaaatcca
agtgaagaagatgcagcaattgtagacaaaatcttatcctccagggtaataaagaaagaa
gtatctgctgggatgacagtagacacagaagagttttttgtaaaatacaagaactactca
tatctccactgtgagtgggccacagaacaacagcttttaaaggataaaagaatccagcag
aaaataaagcgattcaaagtaaggaaagcacaaagagctcacttttttgcagatatggaa
gaggaaccttttaatcctgactatgttgaggtggatcgggtattagaagtgtctctttgt
gaggataaagacactggtgagcctgttatttactatttagtaaaatggtgttcgttgcca
tatgaagacagtacgtgggagctgaaagaagatgtagatcaagcaaaaatagaagaattt
gaacaattgcaagcttccaggcctgactcaaggagattggaccgaccacctccaaactcc
tggaagaagatagaacagtccagggaatataaaaatggcaatcagctcagggaatatcaa
ctggaaggacttaactggctcctattcaactggtacaataggcgaaattgtattttagca
gatgaaatgggccttggcaaaaccattcagtccattacattcctgtatgaaatcctcctg
actggtataagaggccctttcctgatcatagctccgctttccactataacaaactgggag
agggaattccgcacgtggactgacctgaacgttgtggtgtaccatggaagtatgatcagc
aggcaaatgattcagcagtatgagatgtacttcagggactcccagggccgtattgttcga
ggtacctacaggttccaggccattatcacaacttttgaaatgattcttggtgggtgtcca
gaattaaatgcaattgagtggcggtgtgttattattgatgaagctcacagactgaagaac
aaaaactgcaaacttttggaaggactaaaattaatgaaccttgagcataaagtgctgtta
acaggtaccccactgcagaacacagtagaagaattatttagcctccttcattttctggaa
ccattgcgttttcctgctgaatctacattcatgcaggagtttggagaccttaaaacagag
gaacaggttcagaaactacaagctatcctgaaacccatgatgctcaggagattaaaagaa
gatgtagaaaaaaagctggctcctaaggaggaaaccataattgaagtagaactaactaat
attcagaagaaatattaccgagcgattttggagaagaattttgctttcttatccaaagga
gcagggcaggcaaatgtacccaatctggttaacactatgatggaactcagaaagtgttgc
aatcacccttatctcatcaaaggtgctgaagagaagatccttggagagtttaaagaaaca
tatagtccaagtgctcctgacttccacctgcaagcaatgatacagtctgctggtaaattg
gttcttattgacaagcttcttccaaaaatgaaagcaggaggccacaaggtccttatcttt
tctcaaatggtgcgctgccttgatattttggaggattaccttatacataaaaggtatctg
tacgagaggatcgacgggcgcgtgcgagggaacctcaggcaagctgccattgaccgcttc
agcaaaccagactcggatcgcttcgtcttcctcctctgcaccagggctgggggcctgggc
atcaacctgactgctgcagatacctgcatcatttttgactctgactggaatccccaaaat
gacctgcaggctcaagcccgatgccacaggattggtcagaacaaagcagtgaaggtctac
agactgatcacacgtaattcctatgagagagagatgtttgacagagcaagtctgaaactg
ggactggataaggctgtcttgcagagtatgagtggaagagaaaacagtgttggtggtatc
caacaactctccaaaaaagaaatagaagacttgcttcgaagaggtgcctatggtgccatt
atggatgaagaggatgaaggctccaagttctgtgaggaagacattgaccagattctgcag
cgtcggactaaaaccatcacaattgaatccgagggaagaggctccacatttgccaaggct
agttttgttgcatctggaaacaggactgatatttcactagatgatcccaacttctggcag
aaatgggccaaaaaagcagaaatagatattgatgccatcagtggtagaaacagccttgtt
attgataccccaagaatcaggaaacaaacacggcccttcagtgctacaaaggatgagctg
gcagagttgtccgaggtggagagtgagtgtgatgagaaaccaaagctccgccggccgtgt
gaccgttccaatggctatggaaggacagagtgcttccgtgtggagaagaacttgctggtc
tatgggtggggtcgatggagagaaattctgtcccatggtcgcttcaagaggcagctaaat
gagcaggatgtggagataatttgccgagccctgctagcctattgtctcgttcactacaga
ggggatgagaaaataaagagttttatatgggatctcatcaccccaacagaggacggacaa
acacgagagttacagaaccacctcggcttatcagcccctgtgcctagaggaagaaaagga
aaaaaagtgaagacccaggctagcactttcgatatacacaaagctgaatggcttcgaaaa
tacaacccagaacatctgttgcaagatgaaggatacaaaaagcacataaaacaccattgc
aacaaggtcttacttcgagtaagaatgctgtattacttaaaacaagaagtcattggtaat
gaattccaaaaggtcttcgatggaactgatgccagtgaaattgatgtttgggttcctgag
ccagaccactctgaagttcctgctgagtggtgggatgcagatgcagataaatctctccta
attggagtttttaaacacggttatgagaaatacaacactatcagagcagacccagctctt
tgcttcttggaaagagttggaaaaccagatgagaaagcagttgctgccgaacagagagcg
aatgattatatggatggggatgtagaagatccagaatataaaccagcaccagcactgttt
aaagatgacatagaggatgatgtttcatccccaggtgatctcgtaatagcagatggagat
ggacaaatgatggaaggggacaaaatctattggcccactcagtctgccttaacaacgcgt
ctgcgccgcctgataacagcttaccaacgaacaagtaaaaacaggcaggcccagcagatg
cagccaacattcccagtacaaaccagtatgatgcagcttccatatgaagaagctgcacta
aatccaaagatggctgctaagattgaaagacagcaaagatggacaagaagagaagaggct
gacttttacagagttgtgtccacatttggagtggtgtttgaccctgaaaggggacggttt
gactggaccaagttccgagcgatggctcggctgcacaagaagactgatgagagcttggag
aagtacctgtatgcgtttatgtcaatgtgcaggagggtctgtcggctcccctcaaaagaa
gaacttgtggacccaaacatttttatccagcccatcacagaggaacgtgcttcccggact
ttgtaccgcatcgagctcctgcggaaagtgcgagaacaggctctcagacacccccagttg
tttgagcgactaaagctgtgccagccaaacccagacctacctgtctggtgggaatgtggg
actcacgacagggatttacttattggagctgctaagcacggagttagcaggacagattat
catattcttcgtgatcctgaactctcatttatgtctgcccagaggaactataatcaaaac
aaagtggctctctcaaggacttctacgccactcttgcaccagtaccagatggcattatct
gcttctcctcttacacctcagtcaagactgtcagatgctaaagtgaatgcttttgaggac
gcaaaagctaaaaatgaaaatctgaaagaggaccctcagtcttctgaagaggaatccatg
tcaacagaggagacacagacagtactgaaatctgaaactttgagtcccaaaaatggcacc
ccaatacaaattacagaccacagacctagtgtgaaggctgagacagacaggcgcatggtg
gcagcaaggacagagcctctaactccaaacccagcttccaaaaaacagagagtcagcaaa
agggggtctgactctagctctgactcagactctgactcagatagatcatcctgttcttcc
aggtcatcatcttcatcctcttcgtcttcctcatcttgttcccagtctcgatctggctct
agctcttcatcatcttcatcttgttcttcagcatcttcatcctcctcctcatcgtcctca
tcatcatcgtcgtcgtcatcatcatcgtctgaagagagtgatagtgatgaagaggaggca
caaaaacgtgagggaactccacatataaaagcctatgatgaagagagtgtggcctctctg
agcaccacacaagatgagacacaagacagtttccagatgaacaatgggacaccaaattcc
ggttatctcctacaaggtggatacatgttggctgcatcctactggccaaaggatcgagtt
atgattaacaggctggacagcatttgtcagacagtgttgaagggtaaatggccttcagcc
cgaaggagctacgacagcacggcagtggcatcgttctacaccaccaaactgctggacagc
tcaggggcagctgccgagtacagtgagcccagtgcacctacaccccctctggcagctgta
aaagaagaatatgaccaatcaccccagctgtcaaaggaaggtggtttgaaattgactttt
cagaagcagggactgtctcagaaaaggccatttgaaagcgaggagggtgcattgggtcag
cagcaatatctggctcggctacgtgaactccagaatgcttcagaaaccagccttgtcaac
ttcccaaaatcacttcccaaatcaggtacttccagtcacttaacagccagtgccaatgga
gtcatagttgacagtcagcctgtagtcaaaaagagacgaggaagaaggaagaatgtggag
ggggttgatgtcctctttatgaatagaaataaacagcctaaccatgttaatccaggtatt
aactcctgccaggttgctgcaggaataaacccagcactcacttacacacagtcccaaggc
atgctcgatgcagagagcccagttcctgttattaacctgaaagatggaacaaggcttgca
ggtgatgatgcccctaaaagaaaagacttagaaaggtggcttaaagaacatcctggatat
gttgaagattcaggagcttgtattcctaggatgcagctgcacgatgggaggcccaaacaa
aaaagacaccgttgtcgaaaccccaataaactggatgttaacagtttaactggtgaagaa
cgtgttcagctcataaatagaagaaatgcaagaaaggttgggggtgcatttgctccccct
ctgaaggatttgtgcaggttcttgaaagaaaatccagagtatggagtggctcctgagtgg
ggagaagttgtaaaacagtctggcttcctccccgagggaatgtttgaccgcatcctgacg
ggcccggtggtgcgggaagaggtgagccggagggggaggcgccccaagagcgagatcgcc
aaggccacggcggctgcggccgctgcctccgccgccagcgtgcccgtcagccccctgctc
gccaacgggctgctcccgggcgtggacctgcccagcctgcaggccttgcagcagaacctg
cagaacctgcagtcgctgcaggtgacagcgggattgatgggaatgccggccggcctagct
gccggaggagaggccaagaacgtggctgccatgttccccatgctgctgtcagggatggct
ggattaccaaacctgctgggcatgggaggactcctgacaaagtcgacagaatccgttttg
gaggagaaaaagggaaacgagtcaaaggacacggatacaaagaaagaaaggacagaagac
caaaatacggatactggtggtgaaaactctgtttcgagttctccttcaacatcctctgcc
gctgcagctgccaatcctctctctcttaaccctttacttttgtccaacatactttaccca
gggatgcttctcactccaggccttaatcttcatatcccagctttgtctcagtctaatatt
tttgatgtacagaacagtgaaagcaatgacacaggctcagccaagcccacagaagaaaag
gaggaaaattctagggttagagatcaggaagacaaagggggaacagagccaagctctcac
aacgaaaacagcacagatgagggttcagagaaagcagatgcttcatctggatctgacagt
acatcatcttcatctgaggattcggattcgagcgatgaagactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (8)   
   Pfam (8)   
All databases (62)   

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