KEGG   Pseudopodoces humilis (Tibetan ground-tit): 102110416
Entry
102110416         CDS       T02921                                 
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
  KO
K13171  serine/arginine repetitive matrix protein 1
Organism
phi  Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03013  Nucleocytoplasmic transport
phi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:phi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102110416 (SRRM1)
   03015 mRNA surveillance pathway
    102110416 (SRRM1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phi03019]
    102110416 (SRRM1)
   03041 Spliceosome [BR:phi03041]
    102110416 (SRRM1)
Messenger RNA biogenesis [BR:phi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     102110416 (SRRM1)
Spliceosome [BR:phi03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   SR-related proteins
    102110416 (SRRM1)
SSDB
Motif
Pfam: PWI
Other DBs
NCBI-GeneID: 102110416
NCBI-ProteinID: XP_014114014
Position
Unknown
AA seq 885 aa
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
TAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPS
PRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETVVQEATSNS
DIPKAPKPEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPR
RRHRSRSRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSS
SRSRSPPKKPPKRPVSSPPRKTRRLSPSASPPRRRHRPSPPGSPPGKPRRSPTPQQSNRA
RKSRGSVSPSRASAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQQRRQY
RRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKESSPRRR
RRSPSPPPARRRRSPSPAPPPRRRRSPSPPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPS
PPPKRRTASPPPPPKRRASPSPQSKRRVSHSPPPKQRSSPTAKRRSPSVSSKHRKGSPPS
RSNRETRSPPQNKRHSPSPRPRASHPSSSPPPPRRGASASPQRRQSPSPSTRPIRRVSRT
PEPKKTKASTPSPRRVSSSRSASGSPETAPKKHQGPASPARSRSPSANWSPAKKAKSPTQ
SPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAVAAAAATVAAPDTTSVQ
EDQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
NT seq 2658 nt   +upstreamnt  +downstreamnt
atggacgccgggttcttccgcggaaccagtgcagagcaggacaatcgcttcagcaacaag
cagaagaagctgttgaagcagttgaagtttgcagaatgcttagaaaagaaggtggacatg
agcaaagtaaatctggaagtaatcaaaccatggataacaaaacgagtaacagaaatcctt
ggatttgaagatgatgtagtaattgaatttatattcaaccagttggaagtgaagaaccca
gattccaaaatgatgcaaatcaacctgactggttttttgaatgggaaaaatgctagggag
ttcatgggagaactgtggccactgctattaagtgcacaagaaaacattgctggtattcca
actgcatttctggaactgaagaaagaagaaataaaacagcgacagatagagcaggagaaa
ctggcttccatgaagaaacaagatgaagacaaagagaagagagataaggaggacaaagac
aacagagagaaaagagacagatccaggagtccaagaagacgcaagtcccgctctccctcc
ccgcggcggaggtcgtcgcccgtgcgccgcgagcgcaagcgcagccactcccgctcgccc
caccaccgcaccaagagccgcagtgccacccctgcccccgagaagaaagaggccactccc
gagcctgagccctccgtgaaaccaaaggagactgttgtgcaagaggcaacttcaaacagt
gatatcccgaaagctcctaaacctgaacctcctgtaccagagactaaggaaacttcacca
gaacgtaattcaaagaaggagagagagaaggagaaggagaagactcgtcagagatcccca
actcggtccaagtccaggtcaagatcccgatcccgttctccatctcattctcgacccaga
aggcgccatagatcacggtcaagaaggcgacccagcccgcggcgccggccgtccccgcgc
aggaggagcccgccccggagaatgcctcccccacccaggcacaggaggagcagatccccc
gtgaggcggagaagacgctcctcggcctcgctgtccggcagcagctcctcctcatcgtcg
tcgcgctcccgctctccaccaaagaagcctcccaagagacccgtgtccagccctccccgc
aaaacgcgccggctgtcgccctcggccagtcccccccggcgccgccaccggccctcgccc
cccggcagccccccgggcaaaccgcgccgctcgcccacgccacagcagtccaaccgcgcc
cgcaagagccgcggctccgtctcacccagcagggcttcagcacccaaacataagagtact
gagaaaagagaatctccttcgccagcacccaagcccaggaaagcagaattgtcggaatca
gaagaagacaaaggaggcaaaatggctgcagcagattctgtccaacagaggcgccagtac
aggaggcaaaatcaacagtcttcatctgattctggttcttcatcttcctcagaggaggag
aggcccaagaggtcgaacgtgaagaacggggaggtgggcaggcgccgccggcactcgcac
tcgcgcagcccctcgccttcgccccgcaagcgccagaaggaatcctcccctcgcaggagg
aggaggagcccctcgccgccccccgcgcgccggcgccgctccccttccccggctccaccg
ccccggcgtcgccgctcgccgtccccgcctcgccgaaggtctccatcaccacccccgcgc
agacgttctccctctccacggagatactcccccccgatccagaggcgatattccccatct
ccccctcccaagaggagaacagcttctcctcctccccctcccaaaagaagggcctcccct
tccccccagtccaagcgcagagtctcccactccccaccgccaaaacagaggagctcccct
actgctaaacggcgctccccttccgtatcttccaagcacaggaaggggtctcctcccagc
agatccaacagggaaacacgttctccaccacaaaacaaaaggcattcaccttcaccacgg
cctcgagcttcccacccctcctccagccctccgccgccgcgccggggagcgtcggcgtcg
ccgcagaggaggcagtcaccctcacccagcaccaggcccatcaggagggtgtccagaaca
ccagaacccaagaaaacaaaggcttccacccccagcccccggcgcgtgtcctcgtcccga
tctgcgtcagggtcacctgagacagctcccaaaaagcaccaaggacctgcatctcctgcc
cggtctcgctctccttctgcaaactggtcacctgcaaaaaaggccaagagcccaactcag
agcccatcacctgccaggaattcagatcaagaaggtggtggcaagaagaagaagaaaaag
aaggataagaagcataaaaaggataaaaagcacaagaaacacaaaaagcataagaaggag
aaggcagcagtggctgcagcagctgctactgtggctgcaccagacaccacctcagtacag
gaagaccaggaagcagagacagaacccaaaaaggagacagagagtgaacccgaggacaac
ctggatgacctagaaaagcacctgcgggagaaggccctgaggtccatgaggaaggcgcag
gtgtcccccccctcctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (420)   
   KEGG ORTHOLOGY (1)   
   RefGene (416)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (431)   

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