KEGG   Pseudopodoces humilis (Tibetan ground-tit): 102113615
Entry
102113615         CDS       T02921                                 
Symbol
SMARCAL1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
  KO
K14440  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
phi  Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:phi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:phi03036]
    102113615 (SMARCAL1)
Chromosome and associated proteins [BR:phi03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    102113615 (SMARCAL1)
SSDB
Motif
Pfam: HARP SNF2-rel_dom Helicase_C ResIII ERCC3_RAD25_C Flavi_DEAD OmpA
Other DBs
NCBI-GeneID: 102113615
NCBI-ProteinID: XP_005519743
Position
Unknown
AA seq 965 aa
MSAGLTEEQKKRIEENRRLALARRAERLAAQRAEHVGIAAPPEKQQSLGNPGNSKEESNH
VGFTSQHRQNPNTPVEQKSCLQKGYNHYTANQQMAGSHREQQKSCSEDVEQASGLKQLPA
MIPNSLSYSHKHDLDAGSQEHRQHTLINHGTFQQPKCYPAFKKPTGPPHRRFIDNGHPDS
SKDLQTQNKPAIKYVSPPSSTALSDSEMLINTPTERTGGGFASQGSVRMQKLTSSAGVGS
TFEAASHKKASNVTKGKCVKYGEDRFQVEIGYNAELIAVFKRVPSKTYDPAMKKWNFSME
DYSSLLEAANKLSSVILAPLDRENAVGSASGSHFVGSGVDMKSLLKMCKNWKKPSALVKG
KCVLTSRLRFEVDIGYSAEVIGVFKQMDSRNYDMNTRKWNFLLEDYPKLMKVLLSLVSVE
VEPLPEAVIKTFAAQLQRSPSQTDIPDADLSVVDSKIVTSLMPFQREGVNFAISRDGRLL
LADDMGLGKTIQAICIAAYYQQEWPLLVVTPSSVRFTWAEAFHRWLPSLSPESTNVIVSG
KDNLTGSLINIISFDLLSRMDKQLKSTFQVVIVDESHFLKNTKTARCQAAMPLLKAAKRV
ILLSGTPAMSRPAELYTQIAAVQPTFFPQFHSFGLRYCDAKKMPWGWDYSGSSNLTELKI
LLEESIMIRRLKSDVLSQLPAKQRKMVVVAPEGISAKTKAALAAEAKKMAKGYESKQQEK
EALLVFFSRTAEAKIRSVVEYILELLESGNNKFLVFAHHKIMLDAVVAELKKKHVEYIRI
DGCTSSAERQSLCQKFQFSEKQAVAVLSLTAANMGLTLSAADLVVFAELFWNPGILIQAE
DRAHRIGQTSSVNVHYLVAKGTADDYLWPMIQEKIKVLGEAGLSETNFSETAESTNYFPR
PDPKQKTIYDLFQKTFSESRDDADDILFLEAADAGCEFDSGSALQDRETETCSVSPKKKR
RIEEV
NT seq 2898 nt   +upstreamnt  +downstreamnt
atgtcagcaggccttacagaggagcaaaagaaaaggattgaagagaaccgccggctagct
ttggctaggagagcggagaggctggcagcacagagagctgagcacgtgggcatcgctgca
cctccagagaaacagcagagtctgggcaatccgggaaactcaaaggaagaaagcaatcat
gtcgggttcaccagccagcaccgacagaatccaaacacgcctgtggagcagaagagctgt
ctccagaaaggctataaccattacacagcaaaccaacagatggctggctcacacagagag
cagcaaaagagttgttcagaggacgtggaacaagcaagtggccttaagcagctccctgca
atgatcccgaattcactgagttattcccataaacatgacttggatgctggtagtcaggaa
catagacaacacactttaattaatcatggaacattccagcagcccaaatgctacccagct
ttcaaaaagcccacaggaccacctcatcgaagattcattgataacgggcaccctgacagc
agtaaagatttacaaactcagaacaaacctgccattaaatatgtttcaccaccaagcagc
actgccctgagtgattcagaaatgctgataaacacaccgacagaaagaacagggggaggt
tttgcctctcagggcagtgttaggatgcagaagctgaccagctctgctggtgtgggctct
acctttgaagctgcctctcacaagaaagcaagtaatgttacaaaaggaaaatgtgtgaaa
tatggggaagaccgattccaggttgaaatagggtataatgctgaacttattgctgtgttt
aagagggtaccaagcaaaacctatgatcctgctatgaaaaaatggaatttcagcatggaa
gattacagcagtctcttggaagcagcaaataaactttcatcagtaattctggcaccgctg
gacagagaaaatgcggttgggtcagcatcaggctctcattttgttggcagtggggtagat
atgaaatccctcttgaagatgtgtaagaactggaagaaaccctcagcccttgtcaaaggg
aagtgtgtgcttacctctcgcttgcgatttgaggtcgatattgggtattctgcagaagtg
attggagtgttcaaacagatggattccagaaattatgatatgaataccagaaagtggaat
ttcctgctggaggattaccccaaactaatgaaagtgttactgagcctcgtatctgtagaa
gtggagccactgcctgaagcagtaattaagacctttgctgctcaactccagagatctcca
tcacagacagacattcctgatgctgacctttcagtagtggactccaaaattgtgacaagc
ctcatgccctttcagcgggaaggtgtgaattttgcaatttccagagatggacgtttgctc
ctcgcagatgacatgggcctgggcaagaccatccaggccatctgcattgctgcctattac
cagcaggaatggcccttgctggtggtcactccttcttccgtgaggtttacatgggcagag
gcatttcacagatggcttccatccttgagtccagaaagcaccaatgtcatagtgagtggg
aaagacaacctaacaggaagcttgatcaacatcatcagttttgatctcctcagcaggatg
gacaagcaacttaagagcacattccaagtagttattgttgatgaatctcatttcctgaag
aacacaaaaactgcacgctgccaagctgccatgcctctacttaaggctgccaagagagtg
atcctgctttcgggaacgccggccatgtcgcggcccgcggagctctacacgcagatcgcc
gctgtgcagccaaccttcttcccacagttccactcctttgggctgcgctactgtgatgcc
aagaagatgccatggggttgggactactctggatcgtccaacttaactgaactgaaaatt
ttgctggaagagtccatcatgatccgacgtctgaaatcagatgtgctttcccagcttcca
gcaaagcaacgcaaaatggttgtggtggctcctgaaggcattagtgcaaagaccaaagct
gcgttggcagctgaagcaaagaagatggccaaaggatatgaaagtaaacaacaggagaag
gaagctcttcttgtcttcttcagcagaacggcagaagctaaaatccgctcagtcgtagaa
tacatcctggagttactggaaagtgggaataataaattcctggtgtttgctcatcacaag
ataatgctggatgcagtggttgcagagctgaagaagaaacatgttgagtacattcgcatt
gacggctgcacatcttcagctgagcggcagtctctgtgccagaagttccagttctcagag
aagcaggctgtggctgtcctttcactcactgctgcaaacatgggcctgacactgtctgct
gcagatctggtggtgtttgcagagctcttctggaacccagggattttgatccaagcagaa
gatcgagcacaccgaattggacaaaccagctccgttaatgttcactacctggtggctaaa
ggcacagcagatgactacttatggccaatgattcaggagaagatcaaagtgctgggtgaa
gctggtctttcagaaaccaatttctccgaaacagctgagtcaactaactactttcccagg
ccagatccaaaacagaagactatctatgaccttttccagaagaccttctctgagagcaga
gatgatgctgatgatattttgtttttggaggcagctgatgctggctgtgagtttgactct
ggcagtgccttgcaagacagagaaacagagacatgttcagtgagtcccaaaaaaaagcgg
cgtattgaggaagtgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (7)   
   Pfam (7)   
All databases (33)   

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