KEGG   Pseudopodoces humilis (Tibetan ground-tit): 102113924
Entry
102113924         CDS       T02921                                 
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
phi  Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03440  Homologous recombination
phi03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:phi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    102113924 (TOP3A)
   03460 Fanconi anemia pathway
    102113924 (TOP3A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:phi03032]
    102113924 (TOP3A)
   03400 DNA repair and recombination proteins [BR:phi03400]
    102113924 (TOP3A)
Enzymes [BR:phi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     102113924 (TOP3A)
DNA replication proteins [BR:phi03032]
 Eukaryotic type
  DNA Topoisomerases
   102113924 (TOP3A)
DNA repair and recombination proteins [BR:phi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     102113924 (TOP3A)
   FA (Fanconi anemia) pathway
     102113924 (TOP3A)
SSDB
Motif
Pfam: Topoisom_bac zf-GRF Toprim zf-C4_Topoisom zf-C2H2_10 Zn_ribbon_recom Lar_restr_allev
Other DBs
NCBI-GeneID: 102113924
NCBI-ProteinID: XP_005523120
Position
Unknown
AA seq 1014 aa
MNLYGRLFSRGGMLPQPWRCVSRAAEDLALQRIRKVLCVAEKNDAARGIAELLSNRRMRR
REGFSKFNKIYEYDYQIFGQNVTMVMTSVSGHLLAHDFIMPFRKWHSCNPLALFDAEIEK
YCPENYLDIKRTLEREIQQCQALVIWTDCDREGENIGFEIIHVCRAVKPNLQVFRARFSE
ITLHAVRSACENLTQPDQKTSDAVDVRQELDLRIGAAFTRFQTLRLRKIFPDILADQLIS
YGSCQFPTLGFVVERFKAIQAFVPEAFYKIKVTHDHEDGSVVFSWKRNRLFNHTACLVLY
QMCMEDPVATVVDVVSKPKSKWRPLPLDTVELEKLASRKLKINAKETMTIAEKLYTKGLI
SYPRTETNIFPKELNLSALIEQQTQDPNWGEFAQRILDQGGPNPRSGNKTDQAHPPIHPT
KYASNLQGNEQRLYEFIVRHFLACCSQDAKGQETTVEINIANEQFIAQGLMILARNYLEV
YPYDRWSDKVIPLYQKGSRFQPTTVEMMDGETSPPLLLTEADLIALMEKHGIGTDATHAE
HIETIKTRMYVGLTADQRFLPGQLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKK
DKSVVLQQQVQKYKQVFIEAVARANKLDQALAQYLGEAAEIPEQDEVYPAMPVSVRKCPQ
CNSDMVLKTRKNGGFYLSCMGYPACKSAVWFPDFVLDVSRDESICDVCTPRPVHRLKFKF
KKGSVPPVMPLEFVGCIGGCDEMLKELLDLKYLHRSSQPALSTPQPGHHLQANHSLNRAS
SESRQARGTSNLARGHLLSINSSRTPRAAPAAAPDDGNAVVCNCGSEALLLTVRKDGPNK
GRQFYKCSSSTCNFFLWADEQPQDRGTAAPRSSTLLQPAAGRAPAGFQRPGGGREPLGSS
SSDAGGGTMCRCEQPAVTRTVQKDGPNKGRQFHTCPKPREQQCGFFQWADENVAPGPSGD
DSLNHFGSNGYSRGLGSKAKRPDSLSSGSAAKKPRTCSICHQPGHTRKTCPQNH
NT seq 3045 nt   +upstreamnt  +downstreamnt
atgaacctctacgggcggttgtttagcaggggcgggatgctgccccagccctggcgctgc
gtctcgcgggccgcggaggatttggcgctgcagaggatccgcaaggtcctgtgcgtggcg
gagaagaacgatgctgcccgagggatcgctgagctgctctccaacagaaggatgcggcgg
cgagaagggttttccaagttcaacaagatctatgaatacgactaccagatatttggccag
aatgttaccatggtgatgacatccgtgtcaggacatttactggctcatgattttatcatg
ccatttcgcaaatggcatagctgcaaccctttagctctttttgatgctgaaattgagaag
tattgccctgaaaattacctggatatcaagagaacccttgaacgagaaatccagcagtgc
caagccctggtgatctggactgactgtgatcgagaaggagagaacattggctttgagatc
atccatgtgtgcagagctgtaaagccaaacctgcaggttttccgagcccgcttctctgag
atcacacttcatgctgtcagatcagcctgtgagaacctcacccagcccgaccaaaaaacc
agcgatgccgtcgacgtcaggcaggagctggacctcaggataggtgctgccttcaccaga
ttccagactctgaggctgcggaagatcttccctgatattttagcagatcagctaatcagc
tatggcagctgccagttcccaacactgggatttgtggttgaacgctttaaagccatccag
gcctttgttcctgaagccttctacaaaattaaagtgacccatgaccatgaggatggcagc
gtggtcttcagctggaagaggaaccggctcttcaatcacacagcgtgcctggtcctttac
caaatgtgtatggaggatccggtagcaactgttgttgatgttgtgagcaagccaaagagc
aaatggaggcccctgcccctggacactgtggaactggaaaaattggcttcccgcaaactg
aaaataaatgcaaaggaaacaatgacaatagcggaaaaactctatactaaagggctcatt
agttaccctcgaaccgagaccaatattttccccaaggagctgaacctctctgccttgata
gaacagcagacacaggacccaaactggggggagtttgcacagaggattttggatcagggt
gggccaaaccctcggagtggaaacaaaactgatcaggctcaccctcccattcaccccaca
aaatacgccagcaacctgcagggcaatgagcagagactctatgaattcatcgtgcgccac
ttcttggcttgctgctctcaagatgccaaaggacaggaaacaactgtggagatcaacatt
gccaatgagcaattcattgctcaaggactcatgatcctggcccgaaattacctggaagtg
tatccttatgacaggtggagtgataaggttatcccgctgtatcagaaagggtctcgcttt
cagcccaccacagtggagatgatggatggggaaaccagtcctcccttgctcctcacagaa
gcagatctcattgctctcatggaaaaacacggcattgggactgatgccacccacgccgag
cacattgagacgatcaagacgcggatgtacgtggggcttacggcagatcagcgcttcctg
cccggccagctgggcatggggctggtggaaggctatgattccatgggctacgagatgtcc
aagcctgaccttcgagctgagctggaggctgatctaaaactgatctgtgaggggaagaaa
gacaaatctgtagtgttacagcagcaggtccagaagtacaagcaagtcttcattgaagct
gtggccagagccaacaagttggaccaggccctggctcagtatctgggagaagctgcagaa
attccagagcaggatgaggtgtacccagccatgcccgtttctgttcggaaatgtccccag
tgcaacagtgacatggtcctgaagaccaggaagaatggcgggttctacctcagctgcatg
ggctatccagcctgtaaaagtgcagtctggttccctgatttcgtgctggatgtgagcagg
gacgagagcatctgtgatgtgtgtaccccccgcccagttcacagactgaagtttaaattc
aagaaaggcagcgttccccccgtgatgcccctggagttcgttggctgcattggaggctgt
gatgagatgctgaaagaacttttggacctcaagtacttgcacagatcatcccaacctgca
ttgtccaccccccagccagggcatcacctgcaggccaaccactcactgaacagagccagc
agtgagagcaggcaagccagggggacctcaaacctggcacggggacatctgctctccatc
aactcctccaggacccctagggctgctcctgcagctgctccagacgatggcaatgctgtg
gtgtgcaactgtgggagcgaggcgctgctgctgaccgtgcgcaaggacgggcccaacaaa
gggcgccagttctacaagtgcagctccagcacctgcaacttcttcctctgggctgatgag
cagccacaggacagaggcaccgcggctccacgcagctccacgctgctccagcccgctgct
gggagagccccagcgggattccagcgcccaggaggagggagagagcccttgggaagcagc
agctcggatgctggaggtggcacaatgtgcaggtgcgagcagcccgctgtgactcgcacc
gtgcagaaggacgggcccaacaagggccggcagttccacacctgccccaagccccgggag
cagcagtgcggcttcttccagtgggcagatgagaacgtggcaccaggcccttctggagat
gactctttgaaccactttggcagcaatggatactccagagggttgggaagcaaggccaag
agaccagacagtctctcctcaggatctgctgccaagaaaccacggacctgcagcatttgc
caccagcctgggcacacgaggaaaacctgtcctcagaaccactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (36)   

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