KEGG T04704: PAEH1

Paenalcaligenes hominis: PAEH1_10675

Entry

PAEH1_10675       CDS       T04704

Name

(GenBank) RNA-splicing ligase RtcB

K14415

tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]

Organism

phn Paenalcaligenes hominis

Brite

KEGG Orthology (KO) [BR:phn00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:phn03016]
    PAEH1_10675
Enzymes [BR:phn01000]
6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     PAEH1_10675
Transfer RNA biogenesis [BR:phn03016]
Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    PAEH1_10675
Prokaryotic type
   tRNA splicing ligases
    PAEH1_10675

SSDB

Motif

Pfam:

RtcB

Other DBs

NCBI-ProteinID:

AQS51898

UniProt:

A0A1U9K1K2

Position

complement(2150895..2152085)

AA seq 396 aa
MKHVIHHEGAAPIKIWTDDIDPAALAQLQNVSTLPFVHSHGVVAMPDVHVGIGATVGSVI
ATDHAVIPAAVGVDIGCGINAVRLSLTATDLPDNLAPIRHQIERDVPLGAGPAGTHKPKN
MPKFDIELATRLKQLTAKHPLLEKNNAQRQIGTLGSGNHFIEICLDQNDNVWVMLHSGSR
GIGNLIGRYFIEKAKKRMEAFGIQLPDADLAYLPDDSDDFDDYVEAVQWAQDYAFENRRV
MMAKTIAALRRHIKKPFHVTQEAINCHHNYVEQEEHFGRKLWVTRKGAIRARDGDLGVIP
GSMGQRSYIVRGKGNIDSYCSCAHGAGRQFSRTQARKQFSVEDLRAQTEGVECRKDAAVL
DELPSAYKDIDEVMANQEDLVEVLHVLKQVVCVKGA

NT seq 1191 nt +upstreamnt +downstreamnt
atgaaacacgttatacaccatgaaggggctgcgcccatcaagatctggaccgacgatatt
gatccagccgccttagctcaattacaaaatgtctctacgctaccttttgtgcactcgcat
ggggtggttgccatgcctgatgtccatgtgggtattggtgccacagtaggaagtgttatt
gctaccgatcatgcggtgattccggcggcagtcggggtagacatcggatgtgggattaat
gccgtgcgcttgtcgctgacagccacagatctgcctgacaacttagcccctatacgtcac
cagatcgaacgagacgtgcctctgggtgcgggacctgcagggacgcacaagcctaaaaac
atgcccaagttcgatatcgagctggctacgcgcctaaaacaactcacagcaaaacatcct
ctgctagaaaaaaataatgcgcagcgtcaaatcggtaccctaggctcaggcaatcatttt
attgagatctgtttagatcaaaacgataatgtctgggtaatgctgcactctggctcacga
ggtattggcaatttaattggccgttatttcatagaaaaagccaaaaaacgcatggaagcg
tttgggattcagttaccagatgccgatttagcctatttgccagatgacagcgacgacttt
gacgactacgtcgaggccgtgcaatgggctcaagactacgcctttgaaaaccgtcgagtc
atgatggctaaaaccatagcggctctacgccgccatattaaaaaaccgtttcacgttacc
caagaagccattaattgccatcacaattacgtagagcaagaggagcactttggacgcaag
ctctgggtgacacgcaaaggggctattcgagctagggacggtgatttaggcgttattccc
ggcagcatgggccaacgtagctatatagtgcgtggtaaaggaaatattgattcgtattgc
tcgtgtgcacatggggcaggccgtcagttcagtcgcacccaagccagaaaacaatttagt
gtagaggatttgcgtgcccaaaccgaaggcgtagagtgccgcaaagatgctgcagtgtta
gacgagttgccgagcgcttacaaagacattgatgaggtcatggcaaatcaagaagactta
gtggaagtcttgcatgtgttaaagcaggtggtgtgcgtgaaaggggcgtag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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