KEGG   Phaeobacter porticola: PhaeoP97_00479
Entry
PhaeoP97_00479    CDS       T04595                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
php  Phaeobacter porticola
Pathway
php03030  DNA replication
php03430  Mismatch repair
php03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:php00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PhaeoP97_00479 (dnaX)
   03430 Mismatch repair
    PhaeoP97_00479 (dnaX)
   03440 Homologous recombination
    PhaeoP97_00479 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:php03032]
    PhaeoP97_00479 (dnaX)
   03400 DNA repair and recombination proteins [BR:php03400]
    PhaeoP97_00479 (dnaX)
Enzymes [BR:php01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PhaeoP97_00479 (dnaX)
DNA replication proteins [BR:php03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PhaeoP97_00479 (dnaX)
DNA repair and recombination proteins [BR:php03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PhaeoP97_00479 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_gamma3 DNA_pol3_delta2 DUF3646 AAA AAA_30 AAA_5 RuvB_N AAA_22 AAA_19 AAA_24 AAA_14 AAA_16 TIP49 Rad17 AAA_18 DUF815 AAA_assoc_2 SLFN-g3_helicase Glyco_tranf_2_5
Other DBs
NCBI-ProteinID: APG45926
UniProt: A0A1L3I1D4
Position
complement(467333..469156)
AA seq 607 aa
MSDTAGDTAGQSTGQYQVLARKYRPETFADLVGQDAMVRTLKNAFAADRIAQAFIMTGIR
GTGKTTTARIIAKGMNCIGEDGNGGPTTEPCGKCEHCTAIMEGRHVDVMEMDAASRTGVG
DIREIIDSVQYRAASARYKIYIIDEVHMLSTSAFNALLKTLEEPPAHVKFIFATTEIRKV
PVTVLSRCQRFDLRRIEPEVMITLLQKIAGAENAQIAEDALALITRAAEGSARDATSLLD
QAISHGAGETTADQVRAMLGLADRGRVLDLIDMIMRGDAASALTELSAQYAEGADPLAVL
RDLAEITHWVSVVKITPDAAEDPTVSPDERARGSQMAEALPMRVLTRMWQMLLKALEEVA
AAPNAMMAAEMAVIRLTHVADLPTPEQLMRTLQDTPPPPPTGPGGPGNGMAMPQGGGHQQ
GGQYNAPQGAQQGSFPVGPSGGATMSNGNGQAVALAPQMDQALARYPSFEHIVELIRVRR
DGLLLEYVKTYLRLVSYQPGRITIQPTDDAPKDLAQRLGQQLQTWTQARWVISLANEGGG
ETITERDNAAENALRAEASTHPMVQAVLESFPKAKIKRIRTAEELTAEVEAEALPEVEDE
WDPFEEE
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgagcgacacagcaggcgacacagcaggccaatcaaccggtcaatatcaggttctggcc
cgcaaataccggcccgaaacctttgccgatctggtcggccaggacgccatggtgcgcacg
ctaaaaaacgcctttgcagcggaccgcatcgcccaggcctttatcatgaccggcatccgg
ggcaccggtaaaaccaccacggcccgcatcattgccaagggcatgaactgcattggtgag
gatggcaacggcggtccgacaaccgaaccctgtggcaaatgcgaacattgcaccgccatc
atggaaggccgccatgtcgatgttatggaaatggacgccgccagccgcaccggtgttggt
gacatccgcgaaatcatcgattcggtgcagtaccgtgccgcctccgcccgctacaagatc
tacatcattgatgaggtccacatgctgtcgaccagcgccttcaacgcgctgttgaagacg
ctggaagaaccgcccgcacatgtgaaattcatctttgccaccacggagatccgcaaggta
ccagtgacggtgctgtcgcgctgccagcggttcgatttgcgccgcattgaacctgaggta
atgatcaccctgttgcaaaagatcgcaggcgctgagaatgcccaaatcgccgaggatgcg
ctggccctcatcacccgcgccgccgaggggtcggcccgtgatgccacctcgctgctggat
caggcgatttctcatggcgcaggcgaaacaacagctgatcaggtccgcgccatgttggga
ctggcggatcgcgggcgggtccttgatctcatcgacatgattatgcgtggcgacgcggct
tcggccctgactgagctgagcgcgcaatatgccgaaggtgccgatccgctggcagtgctg
cgcgacctagccgagatcacccattgggtgtcggtggtgaaaatcacacccgatgccgcc
gaagatcccaccgtcagtccggatgaacgcgcccgtggcagccaaatggccgaagcgctg
ccgatgcgcgttctgacccggatgtggcaaatgctgctcaaggcgctggaagaggtcgcc
gccgcgcccaatgcgatgatggcagcagagatggcggtgatccggctgacccatgtggct
gacctgccaacaccagaacagttgatgcgcacattgcaggacacgcccccaccgccgccc
acgggccccggcggcccgggaaacggtatggcgatgccacaaggcggtggccaccagcaa
ggcggccagtacaatgccccgcaaggcgcgcagcagggcagcttccctgttggccccagc
ggaggcgcgaccatgtcgaacggcaatggtcaggccgtggctctcgcgccgcagatggat
caggcattggcccgttaccccagctttgaacatatcgtggagctaattcgtgtccgccga
gacggccttttgctggaatatgtgaaaacatacctgcggttggtgtcctatcagcccggc
cggatcactattcagcccaccgatgacgcgcccaaagacctcgcacagcgccttggccaa
cagctgcaaacctggacccaggcgcgctgggtcatttccctcgccaatgagggcggcggc
gagaccatcaccgaacgcgacaacgccgcagagaacgccctgcgcgccgaggccagcacc
cacccgatggtgcaggccgtgctggagagtttccccaaggccaagatcaaacgcatccgc
accgccgaagagctgaccgcagaagtcgaggcagaggccctgcccgaggtcgaggacgaa
tgggaccccttcgaggaagagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (32)   

Download RDF
DBGET integrated database retrieval system