KEGG   Pediculus humanus corporis (human body louse): Phum_PHUM237350
Entry
Phum_PHUM237350   CDS       T01223                                 
Name
(RefSeq) DNA damage-binding protein, putative
  KO
K10610  DNA damage-binding protein 1
Organism
phu  Pediculus humanus corporis (human body louse)
Pathway
phu03420  Nucleotide excision repair
phu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:phu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    Phum_PHUM237350
  09124 Replication and repair
   03420 Nucleotide excision repair
    Phum_PHUM237350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:phu04121]
    Phum_PHUM237350
   03400 DNA repair and recombination proteins [BR:phu03400]
    Phum_PHUM237350
Ubiquitin system [BR:phu04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Adoptor protein
     Phum_PHUM237350
DNA repair and recombination proteins [BR:phu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      Phum_PHUM237350
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      Phum_PHUM237350
SSDB
Motif
Pfam: MMS1_N CPSF_A
Other DBs
NCBI-GeneID: 8230394
NCBI-ProteinID: XP_002426118
VectorBase: PHUM237350
UniProt: E0VJ24
AA seq 1148 aa
MSHHYVVTAQKPTAVTACVTGNFTSPSDLNLILAKNTRLEIHLVTPEGLRPLKEIGLYDR
ISVVKFFRPPHEHKDLLFIVTTRYNAMILECIGDGENIEIKTKAHGNVADRIGKQSETGI
IAVIDPEARVIGLRLYDGLLKIIPLGKDNSELKASSIRMEEVEVQDLNFLHGCQNPTIIL
IHQDINGRHVKTHEISLRDKEFVKMPWKQDNVEPDASIVIPVPEPLCGAIIIGQESILYH
NGAGYVAVAPPVINQSTITCYTQVDSNGSRYLLGDMAGHLFMLLLETEEKIDGTPCVKEN
GLKVELLGEISIPEAITYLDNGVLFIGSRCGDSQLVKLNTSPDENGYYVTIMEAFTNLAP
ILDMVVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIQEHATIDLLGIKGMWALRASLD
SVYDNTIVLAFVGQTRILTLNGEEVEETEIPGFLSDQQSFYCGNVENNNMIQLTPTCARL
ISVETKQLVSEWRPPAGKTISVVACNTVQAICAAGSDLYYLEILKNELVQKGNTTLEYEV
ACLDITPLSEGGKTADIIAVGLWTDISARILKLPDLEELNREYLGGEIIPRSILMTCFEN
INYLLCALGDGSMFYFSLNNQNGILSDKKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTV
IYSSNHKLVFSNVNLKEVNHMCSLNSEAYPDSLALATDSTVTIGTIDEIQKLHIRTVPLG
ESPRRIAYQETTQTFGVITMRMDVHQRSGLIPVKQSASTQAQSISSSSNIGGAHNLKSGP
AASINSFAEFGQEVEVHNLLVIDQHTFEVLHAHQFMQSEYALSLISTKLGDDPNTYYIVG
TAMVNPDESESKQGRILIFQFQEGKLYQVAEKEIKGAAYSLVEFNGKLLASINSTVRLFE
WTAEQELRLECSHFNNIISLYLKTKGDFILVGDLIRSMTLLQYKTMEGCFEEMARDHNPN
WMTAVEIIDDDTFLGAENSFNLFVCQKDSAAATDEERQQMHAVGMFHLGDMVNVFRHGSL
VMQNVGETSTPTTGCILFGTVSGAIGLVTQISANFYNFLHELECKLTEVIKSVGKIKHSF
WRSFTTEIKTEPCDGFIDGDLIESFLDLSHEKMKEVAAGLQIDNGSGMKQEATVDDLVKM
VEDLTRIH
NT seq 3447 nt   +upstreamnt  +downstreamnt
atgtcccatcattatgttgttacggctcaaaagccaacagcggttacagcatgtgtcaca
ggtaactttacttcaccaagtgatttaaatcttattttggcaaaaaatacaagattagaa
attcatttggttaccccagaaggcttgcggcctttaaaggaaattgggctttatgacaga
atatctgtagtaaaattctttaggccaccacatgaacataaagacttacttttcatagtg
actactaggtataatgcaatgatattagagtgcattggggatggggaaaatatagaaatt
aaaactaaagcacatggtaatgtagcagacagaataggaaaacagtcagaaactggtata
atagcagtaatcgatccagaagccagagttattgggctaaggttatatgatggactttta
aagattattccattaggtaaagacaattcagaattaaaagcttccagtataagaatggaa
gaggttgaagtacaagatttaaattttcttcacggatgccaaaatcccacaattattctc
attcatcaagatattaatggtcgacacgttaaaacacatgagatttctcttagggacaaa
gaatttgtgaaaatgccatggaaacaagataatgtggaacctgatgcatcaatagttata
cctgtgcctgagccattgtgtggagctataatcataggtcaagaatctattttatatcat
aatggagctggttatgttgctgtcgcacctcccgtaatcaatcaaagtacaataacttgt
tatactcaagtagactctaatggctcaagatacttattaggagacatggctggtcattta
tttatgttgttactggaaacagaagaaaaaattgatggaactccttgtgttaaggaaaat
ggattaaaagttgaattattaggtgaaatcagcattccagaagccataacatatcttgat
aatggtgtgctttttattggttctcgttgtggagattctcaacttgttaaattaaataca
agtccggatgaaaatgggtactatgtcacaataatggaggcatttacaaatttagcacct
attctcgatatggtggtagtggatttagaaaggcaaggacagggacagttagttacatgt
tctggtgcttttaaagaaggttcattaagaattatcagaaatggtattggtattcaagaa
catgccactatcgatttgttgggaataaaaggaatgtgggctttaagagcttcacttgat
agtgtgtacgataacacaattgttctagcctttgtaggtcaaacaagaatattgacttta
aatggagaagaagtagaagaaacagaaatacccggttttttatcagatcaacaatcattt
tattgtggaaacgtcgaaaacaataacatgattcagttgactcccacttgtgctcgcctt
atatcagttgaaacaaagcaactggtcagtgaatggcgaccaccagcgggaaaaacaatt
agcgttgttgcttgtaatactgttcaagctatatgtgctgcgggtagtgatttgtattat
ttagagatattgaaaaatgaattagttcaaaaagggaacacaacattagagtacgaagta
gcttgcttagacattacacctctttctgaaggtggtaaaacggctgatataattgctgtt
ggactgtggacagatatttctgctcgcattttaaaacttccggatcttgaagagttaaac
agggaatatctaggaggagaaattattcctagatccatattaatgacttgcttcgaaaat
attaattaccttttatgtgctttgggggatggttccatgttttatttttcattaaataat
caaaatgggattttatcggacaaaaaaaaagttacgttaggtacgcagcctacagtttta
cgaacgtttcgctctctgtccaccacaaatgttttcgcttgctcggacagacccacagtt
atttactcttccaatcacaaacttgttttttcaaatgtaaatcttaaggaggtaaatcat
atgtgttccctcaactcagaagcatatcccgacagcttagccttagccactgatagtact
gttactataggaactattgatgaaattcaaaaacttcacatccgaacagtaccactagga
gaatcacctagaaggatagcgtatcaagaaacaacccagacttttggagtcataacgatg
agaatggatgttcatcaaaggtctggtttaatacctgtaaaacaaagtgccagtactcaa
gctcaaagcatctcttcatctagtaatatagggggagctcataaccttaaaagtggacca
gctgcttccataaattcctttgcagaattcggtcaagaagtggaagttcataatttattg
gtcatcgatcagcatacttttgaagtgttacatgctcaccaatttatgcagtcagagtat
gcattgagtttaatatctacaaaattgggtgatgacccgaatacttattacattgtcgga
acagcaatggttaatccagatgaaagtgaatcaaagcaaggaagaattttaatatttcaa
tttcaagaaggaaaattatatcaggttgctgaaaaagaaattaagggtgctgcttattct
cttgtagaattcaatggtaaactcttggccagtataaatagtactgtcagattgtttgaa
tggactgcagaacaagaattaagattagaatgtagccatttcaataatataatatctctt
tatttgaaaacgaaaggtgattttatattagtcggagatttaattcgttcaatgactttg
ttgcaatataaaactatggaaggatgttttgaagaaatggccagagatcataatccaaat
tggatgacggctgtggaaataattgatgatgatacttttttaggtgccgaaaattcattt
aatttgtttgtgtgtcaaaaagacagtgcggcagcgactgatgaggaaagacagcaaatg
cacgcggtaggaatgtttcatttaggtgacatggtaaacgtgtttcgtcacggatcatta
gttatgcaaaatgtcggagaaactagcacacctacaacaggttgtattctttttggcacc
gttagtggagcaataggtttggttacacaaatttctgcaaatttttacaactttttacac
gaattggaatgtaaattaaccgaagttattaaatcagttggtaaaataaaacatagtttt
tggagaagttttacaacggaaataaaaacagaaccgtgtgacggattcattgacggagat
ttaattgaaagctttttagatttgtcacacgaaaaaatgaaggaagttgctgcaggccta
cagattgataatggaagtggaatgaaacaagaagctacagttgatgatttagttaaaatg
gtagaagatttaactcgaatacattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (91)   
   KEGG ORTHOLOGY (1)   
   RefGene (86)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   VECTORBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (102)   

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