KEGG T05759: 113524958

Pangasianodon hypophthalmus (striped catfish): 113524958

Entry

113524958         CDS       T05759

Name

(RefSeq) uncharacterized protein LOC113524958 isoform X1

K05769

Rho guanine nucleotide exchange factor 4/29

Organism

phyp Pangasianodon hypophthalmus (striped catfish)

Pathway

phyp04810

Regulation of actin cytoskeleton

Brite

KEGG Orthology (KO) [BR:phyp00001]
09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    113524958
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:phyp04131]
    113524958
Membrane trafficking [BR:phyp04131]
Others
  Rho GTPase associated proteins
   Rho guanine nucleotide exchange factors (GEFs)
    113524958

SSDB

Motif

Pfam:

RhoGEF SH3_1 SH3_2 PH SH3_9

Other DBs

NCBI-GeneID:

113524958

NCBI-ProteinID:

XP_026767159

Position

Unknown

AA seq 3000 aa
MTEEYFETRSWNSDTFSDCAGDHRSFSKHSPGLRKQDSEGQHAVVDGPQMNTDGEELMVP
LGSECSLMNLDSDLGCAVLEETGFSSLSRTCVFDTPKDSQLFTTSEELMVQVEDSCSAEI
LDDSGCDGAANRSSSEEAGLPSILQSNTASKGLTDSDLVVASRDLVDISSSKCLRKLDSS
YSERKNDVLEINTGEEQLMALLANDSSVMISDDSGHHSSLEIMSEEAGLPSISQVTSEET
LTLTDRSEVAHQLEQTPDLSTDHGNLSSPKSTPDLRNLDSGCDEVLNGSSLQEAGLPSIS
QASVSVQNLIDSQLFTIPKEKPEMIYRRTSAPELNNTSDFTVASSHGDHGIFPSPKSSPD
LRNLDSSYSEGKNNGLEMSMDGEQLMVPLANECSVVTSDDVENAEIVNRLSPEEAGLPSI
SQASMSNTDSINSQLFTVFTQTLRLTDRSESEPQSENISDLDHVDFSSPKHFTDLRNLDS
SHSERKSDGLEMKEEGEELMKPLIGSSNAIILDDSECDEVLNGSSLEEAGLSSISQASVS
SKNLTDSQLLTPSKETLTLSDRCEAAPQLDNAPDLDITNISSPKHSPVLASMESSQTEEK
IDGLEMNMDVEQLMEPLAKECSVIILDDNAADGSSIKIFSKEAGLPSISEACISNPDLME
SQFFPTSVETPELTYRSEAAPRLENISNLVVANKDKMDYCSPKCSPDPRNLENLESSHSE
MKNDGQQMNSDGVQHKVQLENSAEEVSAVILDDSGDDEAANWSSLEEAVLPSILHSNTAS
KDLTDSELFTTEDTLTSTDQSDTVLQLDNTSESGVPSRDLVECSSPDHRNLDLSHLEIKN
DSVQLKTDTDELVVPLRANCYAVILDHLSCDEIVNPSLLEILSKEAGLPFISQASMSDTD
LITDQTEAVALLDNRSDLGAACKYQLDFPSSKSSPDLRNLDSSHSEGKNNGLEMSMDGEQ
LMVPLANECIVVTSDDLENAEIVNRLNPKEAGLPSISQASMSTTDSINSQLFTVFTQTLR
LTDRSEAEPQSENISDLNHVDISSPKHFTDLRNLNSSHSERKIDGLEMKVEGEELMEPLA
DGSNAIILDDSECDEVLNGSSLEEAGLSSISQASESDTISKNLTFEETHTLTDKREAPSQ
LGNSSNLDGSSTDHGNLPSPKSSPDFRNLNTSYSERNRTDKEELVVLLANDCNLVDDVES
AEIDHKLSPEEAGLFSQNDGLEKNKDGEELIVPLDSSAMVLDDSEQDEVLNRPSSEVAGL
LSIIQASMSNTNLISSQIFTTSKHTLAPPDGSEAEPYLENASDSTGASRNEEQSGNISKM
ENPTVSEMSLVSQIMINTNKVEPLGQIYEAGVKPSEVNSNIFVDSLMDICPCDSSRLQPE
GVTSIQKDQGQFSIPNIIKENLLESSAIKDCDYYSVEEGSSSPLYANSFISESNVPMDDE
QTLDLDLDIDQTERRSNDLDDLVNLQFLNTCSVKEFTAIPQKEQEVIYSDNSGYIDSYVM
MSPPGKESQSVTLEHQSVQDSYVGQLPVPVEVFFKESTPSDSVSVTKFTKQVLQGNQAKV
EKVCAKEHEVSISYDDYCMQDKSVLKTSLRFDAHHGSDTNNNTKQHTSETPCTLRSSPLE
QELWNHMNPSLQDGPSNLSNNSASFFEMMDYKRDVLNPLDVEDASQGKTYGKDCQLEENK
EIMADPTIYPITDAHHGLIPSNCQSSKFSQASPVDGPKCQKIHREQSLLPHSDSISVTNG
LGNDESGKAPFCPDSLQYKSYPFIDVSIGTLSDLEPIMESEHPQESSDSSEGEQKDGTSS
VNENECSPLQRDENDALYNVRSMKGYFDKPEDEDSTTRLTNGYDGNEDIPNSASPDQDFI
TTNSEEVDDLSHGPRGSSSNSPGSNQNSLKNKETKSMSAGKSSRFSRFTRISSFRKSKRE
SKDGNKVEPETKLSPEVGEERNQTPNHNPTTDHLTNYEDQSSDDVFGKALGVTWNGQSGS
TSSSKNMQQHNKYSERVQIKPVLDPQKKSKSSDNFRMKLALAQRSLSSFFEIRTGDKDNQ
QDSNMLSQDTKSKQPWKKMKMTKEAEMLKRTLSLPGPSGAKSRRRLQSDFVSGLTEDCPD
LQGFQSSKEDLKSTSHPDASVSGPEAEPAERKTLSKCFESVQSYENISETLIHPTVFALA
NQLSPSWTRSLGSFEGLDTPTRPMTPKPQNPGVWSHRSSFRYPSKSVATSLCSLGEGSSL
EGLSERSQRRTEQREARIAPAQSFDSEYLLEDSNSDNQSQTSLVSTNSATESEPSQDVSK
SSLQSSSSVLRVRRSDQRAVRPRPLSDLCSWSLPLREIGETVVDPIQEQNVTENWKAKAQ
KRSCSDELLGEFQKMQKMKVMMQRSLGTLSTTSEEQQKVRMRLPFTSSQQLSSMSFKDHF
FSQSTPTGLDCLHWPRPVSFSESCLIRPSEHTLRQPAALALVITDGPQDKSGLGDEVGSE
DELYNDFHISANRLGGGEQLAINELISDGSVCAEALWDHVTMDDQELGFKAGDVIEVVDA
TNKEWWWGRVQESEGWFPASFVRLRVNQDEPLEDDVVQGAVESGGAGVGGSCGPGLPCKE
QMRANVINEIMSTERDYIKHLKDICEGYIKQCRKRTDMFTEEQLRTIFGNIDELYRFQKK
FLKALEKKYNKEQPHLSEIGSCFLENQTDFQIYSEYCNNHPNACVQLSKLMKMKKYVFFF
EACRLLQKMIDISLDGFLLTPVQKICKYPLQLAELLKYTNPQHRDYKDVEAALNAMKNVA
RLINERKRRLENIDKIAQWQSSIEDWEGEDVLSRSSDLIFSGDLTKISQPQAKGQQRMFF
LFDHQLVFCKKDLLRRDILYYKGRLDMDQMEVVDVEDGKDKDLNVTVKNALKLISPDGAE
IHLLCAKKPELKQRWLRAFADERQQVQHDRDTGFSITDVQKKQAMQNVSKNPPAGKPKAL
HHLLALKAPLLRSKSSKCLHYPESPGPAFSSSPLPEVIAPPGVLRRAISWVSSQSRDLLR

NT seq 9003 nt +upstreamnt +downstreamnt
atgacggaggagtattttgagactcgctcgtggaacagcgacactttctcagattgtgct
ggagatcataggagcttctctaaacactcccctggcctcagaaagcaggactcagaaggt
cagcatgcagttgttgatggtccacagatgaacacagatggagaggaactcatggtacca
ttgggaagtgagtgcagcttgatgaatttggactcggatttaggatgtgcagttcttgag
gaaactggattttcttctctctcacgtacttgcgtgtttgacacaccaaaagactcgcaa
cttttcacaacttctgaagaactcatggtacaagtagaagacagctgcagtgcagagatt
ttagatgattcagggtgtgatggagctgcaaatcggtcgtcatctgaggaagctggactt
ccgtccatcctgcagtccaacacagcatcaaaagggttgacagattcagatttagttgtt
gcaagcagagatcttgtggatatttcatcttctaaatgcctcagaaagctggactcttct
tattcagaaagaaagaatgatgttcttgagattaacactggtgaagagcaactcatggca
ctattagcgaatgactccagtgtaatgatttcagatgattcagggcatcattcatcactt
gagatcatgtcagaggaagctggacttccttccatttctcaggttacgtctgaagaaaca
cttacactgactgacagaagcgaagtagcacatcagttagaacaaactcctgatttaagc
acagatcatgggaacctttcttctcctaaaagcactcctgacctcagaaatcttgattca
gggtgcgatgaagttctaaatggttcatctcttcaggaagctggacttccttccatctct
caggctagtgtatctgtccaaaatttgatagattcccaacttttcacaattcccaaagag
aaacctgaaatgatctacagacgtacatcagcaccagagttaaacaacacttcagatttc
actgttgcaagcagtcacggagatcatgggatctttccttctcctaaaagctctcctgac
ctcagaaatctggactcttcttactcagaaggaaagaacaatggtctggagatgagcatg
gatggagagcagctcatggtaccactggctaatgagtgcagtgtagtaacttcagatgat
gtagagaatgcagaaattgttaatcgattatctcctgaggaagctggacttccttccatt
tctcaagctagcatgtccaacacagattcaatcaattcacaacttttcacagtgtttaca
cagacactaagactcactgaccgaagtgaatcagaaccccaatcagaaaacatttctgat
ttagaccatgtggacttttcttctcctaaacactttactgacctcagaaacctggactct
tctcattcagaaagaaagagtgatggtctggagatgaaagaggaaggagaggaactcatg
aaacccctgataggtagctccaatgcaattattctagatgattcagagtgtgatgaagtt
ttaaatggttcatctcttgaggaagctggactttcttccatctcacaagctagcgtgtca
tcaaaaaacttgacagattcacaacttttgacaccttctaaagagacacttacactgagt
gacagatgtgaagcagcacctcagttagacaacgctccagatttagatattacaaacatt
tcttctcctaaacactctcctgtccttgcaagcatggagtcttctcaaacagaagaaaag
atcgatggtctggagatgaacatggatgtagagcaactcatggaaccattggcaaaggag
tgcagtgtgattattcttgatgataatgctgctgatggttcatctattaagatcttctcc
aaggaagctggactaccttccatctctgaggcttgcatatccaacccagatttgatggag
tcacaattttttccaacttccgtagagacacctgagctcacctacagaagtgaagcagct
ccccggttagaaaacatttcaaatttagttgttgcaaacaaagataaaatggattattgt
tctcctaaatgttctcctgatcccagaaacctggaaaacctggagtcatctcattcagaa
atgaagaatgatggtcagcagatgaacagtgatggagtgcaacacaaagtgcaattggaa
aacagtgcagaagaggtcagtgcagtgattttagatgattcaggagatgatgaagctgca
aattggtcatctcttgaggaagctgtacttccttccatcttgcacagcaacacagcatca
aaagacttgacagattcagaactttttacaactgaagatacacttacatctactgaccaa
agtgacacagtgctccagttagacaacacatcagaatcaggtgttccaagcagagatctt
gtagaatgttcttctcctgaccacagaaatctggatttatctcatttagaaataaagaat
gatagtgttcaattaaaaacagacacagatgaactcgtagtaccattgagagccaactgc
tatgcagtgattttagatcatttatcctgtgatgaaattgtgaatccatcattgctcgag
atcttgtccaaggaagctggacttcccttcatctcccaggccagcatgtctgatacagat
ttaattactgaccaaacagaagctgtggccctgctagacaacagatccgatctaggtgct
gcatgtaaatatcaacttgattttccttcttctaaaagctctcctgacctcagaaatctg
gattcttctcattcagaaggaaagaacaatggtctggagatgagcatggatggagagcag
ctcatggtaccactggctaacgagtgcattgtagtaacttcagatgatctagagaatgca
gaaattgttaatcgattaaatcctaaggaagctggacttccttccatttctcaagctagc
atgtccaccacagattcaatcaattcacaacttttcacagtgtttacacagacactaaga
ctcactgaccgaagtgaagcagaaccccaatcagaaaacatttctgatttaaaccatgtg
gacatttcttctcctaaacactttactgacctcagaaacctgaactcttctcattcagaa
agaaagattgatggtctggagatgaaagtggaaggagaagaactcatggaacccctggca
gatggctccaatgcaattattctagatgattcagagtgtgatgaagttttaaatggttca
tctcttgaggaagctggactttcttctatctcacaagctagcgagtctgatacaatatca
aaaaacctgacttttgaggagacacatacactgacagacaaaagggaagcaccatctcag
ttaggcaacagttctaatttagatggttcgagcacagatcatgggaacttaccttctcct
aaaagctctcctgacttcagaaatcttaacacgtcttattctgaaagaaatagaactgat
aaagaggaactcgtggtactactggcaaatgactgcaatttagtagatgatgtagagagt
gcagaaattgatcataaattatctcctgaggaagctggacttttttcacagaacgatggt
ctggagaagaacaaagatggagaggagctcattgtacccctggactccagtgcaatggta
ttagatgattcagagcaggatgaagttctaaatcgtccttcttctgaggtagctggactt
ctttctatcatacaggctagcatgtccaacacaaatttgatcagttcacaaatttttaca
acttctaaacacactcttgcaccaccagatggaagtgaagcagagccttatttagagaat
gcatctgattcaactggtgcaagtagaaatgaagaacaatcaggtaatataagtaaaatg
gagaatcccactgtttctgaaatgtctttagtatcacaaataatgataaacacaaataag
gtagaacctctgggacagatttatgaagctggggtaaaaccttctgaggtcaatagtaac
atatttgtggattcattaatggacatatgtccttgtgacagctcaaggcttcaacctgaa
ggtgtaacatcaatccaaaaagatcagggacaattttcaattccaaacatcatcaaagag
aacttattagaaagttctgctattaaagactgtgattattattcagtagaggaaggttcc
tcaagtccactgtatgctaacagttttatttcagagtctaacgttccaatggacgatgaa
caaactttggatttggatttggacattgatcaaactgaaagacggtctaatgatttagat
gatttagtaaatttgcagtttctgaacacttgcagtgtgaaggaattcactgccataccc
cagaaagagcaggaggtcatttattcagataactcgggttatattgactcttatgtgatg
atgtctccacctggtaaagaatcacaaagtgttactctcgaacaccaaagtgttcaagac
agctatgtaggacaacttccagtcccagttgaggttttcttcaaggaatcgactccatca
gattctgttagcgtcaccaaattcaccaaacaggtcctgcaaggaaaccaggctaaagtt
gaaaaggtctgtgcaaaagagcatgaagttagtatttcatatgatgattattgtatgcag
gataagtctgtcttaaaaacctcactgcgttttgatgcacatcatggttcagacacgaac
aataacacaaagcaacacacatctgagacaccttgcactttacgtagttcaccactagaa
caggaactctggaatcatatgaatccatccttgcaagatggtccttcaaatttatcaaac
aattctgccagcttctttgaaatgatggattacaaaagggatgttttaaatccacttgat
gtagaagatgcttctcaggggaagacatatggaaaagattgccagttggaggaaaacaag
gaaatcatggcagatcctactatctatccaatcacagatgctcatcatggactgattcct
tccaattgtcaaagctccaagttttcacaagctagtcctgtagatggacctaaatgtcag
aagatccaccgagagcaaagcctgctgcctcactctgactcaatcagtgttaccaatggg
ttaggaaatgatgaatccggaaaagcacctttttgtccagattctcttcagtacaaaagt
tacccttttattgatgttagcattggtacactatcagatttggagcccattatggagtca
gaacaccctcaggagagctcagacagttcggagggagaacagaaagatggtacatcatct
gtgaatgagaacgaatgcagccctttacaaagggatgaaaatgatgcactatacaatgtc
aggtctatgaaaggatattttgataaaccagaagatgaagacagcactactcgtctgaca
aatgggtatgatggtaatgaggatattcccaattctgcatctccagatcaagactttatc
accacaaacagtgaagaagttgatgatctcagtcacggcccaaggggaagcagctccaac
tcccctggcagcaaccaaaactcattaaagaacaaggagaccaagagcatgtctgcaggg
aaaagctcaaggttctctaggttcacaagaatctcctccttccgcaaaagcaagagagag
tccaaggatggaaacaaggttgaacctgagacaaaactatctcctgaggttggagaggag
agaaatcagacacctaatcataatcctactacagatcacttgacaaactatgaggatcaa
tctagtgatgatgtctttgggaaagcccttggtgtaacttggaatggacaatccggatcc
acgtccagctccaagaatatgcaacaacataacaaatacagtgaacgagtgcaaattaaa
cctgtacttgatccccaaaagaagagcaagagcagcgataacttccgcatgaagcttgct
ctggctcagaggtctctgtcgagcttctttgagatcagaactggtgataaagacaaccaa
caggattccaacatgctgagccaggatacaaaatccaagcagccttggaagaagatgaaa
atgactaaggaggctgagatgctaaagagaactctgtctcttcctgggccaagtggtgcc
aagtccagacgtcgcctccagagtgactttgtgtctgggttaactgaggactgtccagat
cttcagggattccagagctccaaggaggatttgaaaagcacatcacaccctgacgcatca
gtgtctggacctgaggcggagcctgctgagaggaaaacactatctaagtgttttgagtct
gtccaaagttatgagaacatctcagagacactcatacaccctactgtttttgcacttgct
aatcagctatctccatcctggacaagatccctgggttcctttgaaggacttgatacgcca
actaggccaatgactcccaaaccacaaaatcctggggtttggagtcacagaagcagcttc
cgttacccctcaaaatccgtagccacctccttgtgctcgctgggtgagggttcgagtttg
gagggactgtcagaacgttcacagaggcggaccgagcaaagagaagcacgaattgcaccg
gctcagtcctttgattctgagtacttacttgaagacagcaactcggacaaccaatctcaa
accagcctggtgtccaccaactcagccactgagtctgagccttcacaggatgtcagtaaa
tcatctctccagtcatcttcctcggtgctccgtgtcagaagaagcgatcagcgtgcggtc
cgacccagacctctttccgacctctgcagctggagtttacctctcagggaaatcggagaa
acggtggttgatccgattcaggagcagaacgtcacagaaaattggaaggctaaggcacag
aagagatcgtgctcagatgagctgctcggggagttccagaagatgcagaagatgaaggtg
atgatgcagaggagccttgggacgctgagcacaacgtctgaggaacagcagaaagtgagg
atgagactgcccttcacttcttcacagcagttgtcctccatgtcttttaaagatcacttc
ttctcccagagcactccgactggactcgactgtctccactggccacgcccagtttcattc
tcagagtcgtgtctcattcgaccttcagagcacacgctcaggcagccggccgctctcgcg
ttggtgatcactgatggacctcaggataaatcgggtctgggtgatgaggtgggcagtgaa
gacgagctgtacaacgacttccacatttctgccaatcgcttaggaggaggagaacaactc
gctattaatgagctgatcagcgatggcagcgtgtgcgccgaggctttgtgggatcacgtc
accatggacgaccaggagctcggcttcaaggccggagacgtcatcgaggtggtggacgcc
accaataaagagtggtggtggggacgagtgcaggagagcgagggatggttccccgccagc
ttcgtccggctgcgtgtgaatcaggacgagccgctggaggatgatgtagtccagggcgcg
gtggagagcgggggtgcgggggtgggcgggtcgtgtgggcccgggttaccgtgtaaagag
cagatgagggcgaatgtgattaacgagatcatgagcacggagagagactacatcaaacac
ctgaaggacatctgtgagggctacattaaacagtgccgtaaacggaccgacatgttcaca
gaggagcagctcaggaccatcttcggcaacatcgacgaactttatcgcttccaaaagaaa
tttctcaaagcgctggagaaaaaatacaacaaagagcaaccacacctgagcgagatcggc
tcctgcttcctggagaaccaaacggattttcagatttactcggagtactgtaacaatcac
cccaacgcctgcgtccagctctccaagctgatgaagatgaagaagtacgtgtttttcttc
gaggcgtgtcgcctgctgcagaagatgatcgacatctcgctcgacggctttctgctcaca
cctgtgcagaagatctgcaaatatccactgcagctcgccgagctcctcaaatacaccaac
cctcagcaccgagattataaagacgtggaagctgctttaaacgcgatgaagaacgtggcg
cggctgatcaacgagaggaaacgccgtctggagaatatcgataaaatcgctcagtggcag
agctccatcgaggactgggagggcgaggacgttctgagtcggagctcggatctgattttc
tcaggagatttaaccaaaatctcacagcctcaggccaaaggtcaacagcgcatgttcttc
ctgtttgatcatcagctggtcttctgcaaaaaggatctgctccggagggacattttatat
tataaaggacgcctggacatggaccagatggaggtggtggatgtagaagacggaaaagat
aaagatctgaacgtgacggtgaagaacgcgctgaagttaatatctccagacggagcagag
attcatctcctgtgtgctaaaaaacccgagctgaagcagcgctggctccgagccttcgcc
gacgagagacagcaggtccaacacgaccgagacacgggattttccatcacagacgtgcag
aagaaacaggccatgcagaacgtgtcgaaaaatcctccagctggaaaacccaaagcgtta
caccacctgctggctcttaaagctccacttctacgctccaaaagctccaagtgccttcat
tacccagaatcccctgggcctgccttctcctcctccccccttcctgaagttatagcgccc
cctggtgtcctgcgcagggccatttcctgggtctcctctcagagtagagacctgctccga
tag

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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