KEGG   Pangasianodon hypophthalmus (striped catfish): 113527776
Entry
113527776         CDS       T05759                                 
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
  KO
K05211  glutamate receptor ionotropic, NMDA 2C
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04020  Calcium signaling pathway
phyp04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    113527776
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    113527776
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:phyp04040]
    113527776
Ion channels [BR:phyp04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   113527776
SSDB
Motif
Pfam: Lig_chan Lig_chan-Glu_bd SBP_bac_3 NMDAR2_C ANF_receptor
Other DBs
NCBI-GeneID: 113527776
NCBI-ProteinID: XP_026771710
Position
Unknown
AA seq 1331 aa
MAIHQGCLSFSLQLLLLLTAMLHYQARPFFGPPTVNVAVVFSSSGHQGEIKGRLSRENFL
DLPLDVNPITVLVNDTSPSALLTRLCQTMAAESLHGVVFEDDVDSEAVAQILDFLSSQTS
IPIVGINGGSALVIPHKAEGSTFLQMGASIEQQINTMFKVMEEYNWGSFVVITSLYPGYE
NFVDYIRSFTDSSYFLWELQDVLSFEMSVGANDIRSRRLLQQVDAQVYLVYCSHEEAQYL
FRMASDVGLLGPGYIWVIPSMAVGNPEASPPDSFPIGVISIISDHWRKTLRQRVREGVAV
VVQGVYSFHKHRGFVPEAHSQCNSSSKSYDHYSLFRHMLNVTWEHRDLSFNAHGYLTNPS
MVIIALDRERLWDKVGSYEAGFLHMRYPVWPRYGSFLEPVSDNRHLTVATLEERPFVIVE
SVDPSTGTCVRNTVPCRRQANRTEGGIGHSEPYTKLCCKGFCIDILKKLSRTIKFSYDLY
LVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIIDFSVPFVETGISVMVA
RSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFIFEYFSPVGYNRSLVNAKEPGGPT
FTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQY
IDTVSGLSDKKFQKPQEHYPPFRFGTVPNGSTERNIRSNYPDMHSHMTKYNQKGVEEALN
SLKSGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSRWKRPIDLA
LLQFLGDGDTQRLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWE
HLLYWKIRHCVHKSDRLDFLLAISRGIYSCFNGVEDMGKSGNLQNLDITANYAQANMLKM
LQTAKDIVSSAKVENSLDKATKTIENWSRKGGSLPARIPQVTTTETLPGQLSYITNITEN
HSSLVQRSLTPQFTQHYAETASPPHASTQRLISHPTPLHYTVPSRSGGLYNGLPPMSSIS
APHLATYDLHSQKSAKMASRFISHKDLQAPDIFAEHQEPYHTFVGPRWKKRSQSCLEETV
DLRGLHDDKGHNACLAEVQANHFAHDVHPSSMESPYRPGDITCNSCINTYADPGLDHIPL
IGKRKIHRRPSFLKATWGPGRVRFPNERPLDPAYRVDMPDLFPFTEVCGRERNNKYHPLP
VEHIYLHSYRRQPRKGQRLRHSQSTYLPSYREAVHHDAIGVRRASSLVHRQYSYPDLPAY
QRPLPYGPAELCNIFPCMGHPRDSGYRGYRAPVHLQDSHLLPVPGSRVLYRVGSPGVPLT
WGRISSLESEV
NT seq 3996 nt   +upstreamnt  +downstreamnt
atggccattcatcaggggtgtttgagtttctctctccagctcctcctgttgcttactgcc
atgctgcattaccaggctcgtcctttctttggcccacctacagttaatgttgcagtggtg
ttcagcagctctggccaccagggtgaaataaagggccgtctgagccgggagaacttcctg
gacctgccgctggatgtgaaccccatcactgtgctagtaaatgatacaagccctagtgca
ctgcttactcgcctctgtcagaccatggctgctgagagcctccatggtgtggtgtttgag
gatgatgttgactcagaggcggtagctcagatcctagactttctctcctcccagacttcc
atacccatagttggcattaatggaggatctgccttagtcatccctcacaaggctgaaggt
tcgactttcctccagatgggagcttccattgagcagcagatcaatactatgttcaaagta
atggaggaatacaactggggcagctttgtggtgatcaccagcctttatccaggctatgaa
aactttgtggactacatccgctctttcacagactccagctactttctttgggagctgcag
gacgtgctaagcttcgagatgtcggtgggagccaatgacatccgctcacgccggctgctg
caacaggtggatgctcaggtgtatctggtgtactgctcacacgaggaggctcagtatctg
ttcaggatggcgtctgatgtcgggctcctcggacctggctacatttgggtcatccccagc
atggcggtaggaaacccagaggcttcacctccagatagttttccgattggggtcatcagc
attatttcagaccactggaggaaaactctgcgccagagggtgagggaaggagtggctgtg
gtggtgcagggggtgtacagtttccacaagcatagaggatttgttcctgaagcacacagt
caatgtaacagttcgtcaaaatcctatgaccactattcactttttagacatatgctaaat
gtgacatgggagcacagagacttgtctttcaatgctcatggctatctcacaaatccctcc
atggtgatcatcgctttggaccgagagagactctgggataaggtagggagttatgaggca
ggatttctgcacatgcgctacccagtttggcctcgctatggcagcttcttggagcctgtg
tctgataaccgtcacctgacagtggccacactggaggagaggccctttgtcatcgtggag
agcgttgatccaagcacagggacatgtgtgaggaacaccgtgccctgtcgtcgccaggct
aacaggaccgaaggtggtattggtcattcagagccttataccaaactgtgctgcaaaggc
ttctgcatcgacattctcaagaagctctcgcgcaccatcaagttctcctatgatctctac
ctggtcaccaatggtaaacatgggaagctggtccgaggcatctggaatgggatgataggc
gaggtcttctacaagcgtgcagatatggctattggctcactcactattaatgaggaacgt
tcagagatcattgacttttcagtgccatttgtggagactgggattagtgtcatggtagct
aggagcaatggcactgtctccccatccgcctttctagagccttacagtccagcagtgtgg
gtcatgatgtttgttatgtgcctgactgttgtggctgtaacagtgttcatctttgagtac
tttagccctgtcggatataaccgtagcctagtcaatgccaaagagcctggggggcccaca
ttcactattgggaagtcagtctggctcctatgggggatcgtctttaataactctgtccct
atagaaaaccctaaaggaacaaccagcaagattatggtgctagtttgggccttctttgct
gtcatctttctagccagctatactgcaaatttagctgccttcatgatccaagagcagtat
attgacactgtatctgggctcagcgataaaaagtttcagaagccccaggagcattacccc
ccttttcgcttcggcacagtcccaaacggcagcactgaaagaaacattcgcagcaattat
ccagacatgcacagtcacatgaccaaatacaaccagaagggagtggaagaggcgctcaac
agtctcaaatcagggaagctggatgccttcatatatgatgctgcagtgcttaattacatg
gctggcaaggatgagggctgcaagctggtgaccattggcagtgggaaggtgtttgctaca
acaggctatggcattgctttgcagaaggactcccgctggaaacgccccatagacctggct
ctcctccagttcctgggagatggggacacacagagactggaaactgtatggctgtctgga
atatgccagaatgagaagaatgaggtgatgagttccaagttggacatagacaacatggca
ggtgtcttctacatgctactagtggctatgggtcttagtctgcttgtctttgcctgggaa
catctgctttattggaaaatcagacactgtgtgcacaaatctgaccgtctagacttcctc
ttggccataagcaggggaatttacagctgctttaatggtgttgaggacatgggaaaatct
ggaaacttgcagaatcttgacatcacagcaaactatgcccaggctaacatgcttaaaatg
cttcagacagccaaagacattgtctcctcagcaaaggtagagaattctttggacaaggca
acaaaaaccattgagaactggagtcggaaaggtgggagtttaccggcacgcattccacag
gtgaccaccacagagacactcccaggtcagctctcttacattactaacatcacggaaaac
cactcatccctcgtgcagcgctctttaacgccccaattcacacaacattatgctgaaact
gccagtccaccacatgcatctactcaaagactgatatcacacccaactccactacattac
accgtcccttcccgatctggtggcctgtataatgggctgcctcccatgtctagcattagt
gctcctcatttagcaacatatgatctgcattcccaaaagtcagccaaaatggcctctcgt
ttcatctcacataaagatctacaggcaccagacatcttcgctgagcatcaggaaccttac
cacacctttgtaggccccagatggaaaaagagatcccaaagttgtctggaggagactgtg
gatcttagaggattacatgatgacaaaggccacaatgcgtgtcttgcagaagtccaagca
aaccattttgcacatgatgtacatccttcttctatggaaagcccttatcgaccaggagat
attacctgtaattcctgcattaacacatatgcagatcctgggttagatcacataccttta
ataggaaagagaaaaatccatcgcaggccctccttccttaaagccacctggggcccaggc
agggtgcggtttccaaatgaaaggcctcttgatccagcctatcgagtggacatgccagat
ctgtttcctttcacagaggtatgtggtagagagagaaataacaaataccaccctttgcct
gtggaacacatttaccttcactcataccgccgccagccaagaaagggtcagagattaagg
cactcccagtccacctatctgccctcttacagggaagcagtacatcatgatgccataggt
gtgaggagggcctccagccttgtacatagacaatactcctaccctgaccttccagcctac
cagaggccactgccatatggaccggcagagctgtgcaacatcttcccctgcatgggccat
cccagagacagtgggtatagggggtatagggctcctgtacacctgcaggatagccatctg
ctccccgttccaggcagcagggtgctttacagggtcggctccccaggtgtacctctgaca
tggggaaggatctctagtctggagtctgaggtttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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