KEGG   Pangasianodon hypophthalmus (striped catfish): 113529906
Entry
113529906         CDS       T05759                                 
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 4-like isoform X1
  KO
K02602  cytoplasmic polyadenylation element-binding protein
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04114  Oocyte meiosis
phyp04914  Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    113529906
 09150 Organismal Systems
  09152 Endocrine system
   04914 Progesterone-mediated oocyte maturation
    113529906
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phyp03019]
    113529906
Messenger RNA biogenesis [BR:phyp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     113529906
   Factors involved in mRNA localization
    Trans-acting binding proteins
     113529906
   mRNA cycle factors
    P-body specific factors
     113529906
SSDB
Motif
Pfam: RRM_7 CEBP_ZZ RRM_1 zf-U1
Other DBs
NCBI-GeneID: 113529906
NCBI-ProteinID: XP_026775295
Position
Unknown
AA seq 729 aa
MGDYSFGVLVKNNTSNKAVFPVRIHPHLQHPVHQPSSPPAFINSNTPSSGGNAGSAWLFP
AVTAHANTQDEILESDKTKAQQQQQEDQEGQEKRPRTPQGHQETVNIMSELENTMPEEGQ
LDKGGVENGNGKEGLRIESPVLSGFDYQEPAGIGTLAQSSSSSLPGFSSWSTAIPANPSA
MMEEVGFFSQTATTANAAPPLLFQNFSHHASPGFGGSFSHQIGPLSQHHPPPHFQHPHNQ
HQQNRRSPASPHPPPFNHRNAAFSQLSHLGSNLNKPPSPWGNYQSQSSTLSSSSWSPGGG
YGGWGGSQGREYRRGLNGGMTAINSISPLKKSFPNSQASSQKYARNSTSFNSKPWMEDSI
NRNDSFFPFQQERSRSFDGFSMHSLENSLIDIMRAEQDSLKGRFGFSHPPEEGSLSGNAR
NYGRRRGPSSLFPMEDERSFGDDERSEQTLGGLGSPHCFPHQNGERIERYSRKVFVGGLP
PDIDEDEITASFRRFGHLFVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACMEEEG
KLYLCVSSPTIKDKPVQIRPWNLNDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIM
DRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPY
VLDDQLCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDR
PRHISFRWN
NT seq 2190 nt   +upstreamnt  +downstreamnt
atgggggattacagttttggagtcctggttaaaaacaacacgtctaacaaagccgttttc
ccagtcagaatccacccgcacctgcaacatccggtccaccagccttcaagcccacctgct
ttcataaacagtaatactccaagcagtggtggaaatgcaggctccgcttggcttttccct
gctgtaacagcccatgctaatacgcaagatgagatactggagtctgacaaaaccaaggcc
caacagcagcaacaagaagaccaagaaggacaggaaaagcgacctcgtacgcctcagggc
caccaagaaacggtgaacatcatgtctgaactggaaaacaccatgccagaggaaggccag
ctggacaaggggggtgtagaaaatggcaatggaaaagaaggtctgcgaattgaatctcct
gtgttatcggggtttgactatcaagagcctgctggcattgggacgttggcacagtccagc
agctcctctttgcccggcttcagcagctggtccacggctattcccgccaatccttctgcc
atgatggaagaggtgggtttctttagccaaactgccaccactgctaacgctgcccctcca
ttgctgttccaaaacttctctcatcatgcaagtcctgggtttggggggagtttttcccat
cagattggcccactgtcccagcaccaccctccccctcacttccagcacccccacaatcag
caccagcagaatcgcaggtcacccgccagcccacaccctcctccctttaaccaccgcaac
gctgcattcagccagctgtctcatttggggagtaacctaaataaaccgccttcgccatgg
ggaaattatcagagccaatcctccaccctttcctccagctcgtggagtccaggtggaggt
tatggaggatggggaggctctcaggggcgagaatacagacgaggcctgaatggaggcatg
actgcaattaactccatttcaccactgaagaaatccttcccaaacagccaggcttcttca
cagaagtatgcccgcaacagcacaagcttcaactccaagccatggatggaggatagcata
aaccgcaatgacagcttctttccttttcagcaggagcgcagtcggtcctttgatggcttc
agcatgcactctctggagaactcactgattgacattatgagagctgagcaggattctttg
aaaggtcgctttggcttttcccatccacctgaggagggctctctctctgggaatgcaagg
aattatggaagacgacgaggtccctcgtccctgttccccatggaggacgaacgcagtttt
ggggatgatgagaggtctgagcagactcttggtggtctaggttccccacactgctttcct
catcagaacggtgagcgtatcgaacgctactctcgcaaagtgttcgttggtggactacct
cctgatatagatgaagatgaaatcactgctagtttccgtcggtttggacatttgtttgtg
gattggcctcacaaagcagagagcaagtcctactttccacccaaaggttatgcatttcta
ctgtttcaagaggagagctcagtccaagcgctgatagatgcctgcatggaggaggaaggg
aagctctacctgtgtgtgtcaagccccaccatcaaagacaagcctgtacaaatccgtcca
tggaatctgaacgacagtgattttgtgatggatggctctcaacctctggaccccaggaaa
accatctttgttggaggagtgccacgacctcttcgagcagtggagctggcgatgattatg
gacaggctgtatggaggggtgtgttatgctggcattgacactgaccctgagctgaaatat
cctaagggagccggacgcgtggccttctccaaccagcagagctacatcgctgctatcagc
gctcgatttgtgcagctgcagcatggcgaaattgataaacgggtggaagtgaagccatat
gtcctggatgaccagctgtgtgatgagtgccagggcacacgctgtgggggcaagtttgca
cccttcttctgtgccaatgtcacctgtctgcagtactactgtgaatactgctgggcagcc
atacattcgcgtgcagggcgagagttccacaagcccctggtaaaggagggaggagaccgg
cctcgccatatctccttccgctggaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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