KEGG   Pangasianodon hypophthalmus (striped catfish): 113532788
Entry
113532788         CDS       T05759                                 
Name
(RefSeq) ras-related protein ORAB-1-like
  KO
K07874  Ras-related protein Rab-1A
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    113532788
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:phyp04131]
    113532788
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phyp04147]
    113532788
   04031 GTP-binding proteins [BR:phyp04031]
    113532788
Membrane trafficking [BR:phyp04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    113532788
 Autophagy
  Other autophagy associated proteins
    113532788
Exosome [BR:phyp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   113532788
  Exosomal proteins of other body fluids (saliva and urine)
   113532788
  Exosomal proteins of colorectal cancer cells
   113532788
GTP-binding proteins [BR:phyp04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    113532788
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA SRPRB DUF6043 AAA_5 AAA_7 AAA_22 Antigen_Bd37 ABC_tran AAA_29 AAA_16 TniB
Other DBs
NCBI-GeneID: 113532788
NCBI-ProteinID: XP_026780218
Position
Unknown
AA seq 209 aa
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEMDSKIVKLQ
IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLEEIDRYACENVSKLLVG
NKSDLTSKKVVDFTTAKEFAETLKIPFLETSAKNASNVEKAFLTMASEIQKRVVEDSVQN
ETVKVGKINSAPLWHGAQKATAEEVNTCC
NT seq 630 nt   +upstreamnt  +downstreamnt
atgaatcctgaatacgactacctattcaagcttctgctgattggagactctggcgtgggg
aagtcatgtctgctgttgcgttttgctgacgacacctatactgaaagctacatcagcacg
ataggggttgacttcaaaatcaggactattgaaatggacagcaagatagttaaactgcaa
atttgggatacagctggccaggagagatttcgcactattacctccagctattacagaggt
gctcatgggattatcattgtatatgatgttactgaccaggagtccttcaacaatgtgaag
caatggttggaggagattgatcgctatgcatgtgaaaatgtctcgaagttgctggtgggg
aacaaaagtgatttaacatcaaaaaaggtggtggacttcacgacagcaaaggaatttgct
gagacacttaaaatcccattccttgagacaagtgcaaagaatgcaagcaatgtggagaag
gcatttttaacaatggcctctgaaatccagaagcgagtcgtggaagacagcgttcagaac
gagacagtcaaagtgggaaaaatcaatagtgctcctctgtggcatggagctcagaaagca
acggctgaggaggtcaacacctgctgttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (17)   
   Pfam (17)   
All databases (28)   

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