KEGG   Pangasianodon hypophthalmus (striped catfish): 113532922
Entry
113532922         CDS       T05759                                 
Symbol
hnf1b
Name
(RefSeq) hepatocyte nuclear factor 1-beta isoform X1
  KO
K08034  transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:phyp03000]
    113532922 (hnf1b)
Transcription factors [BR:phyp03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain POU
    113532922 (hnf1b)
SSDB
Motif
Pfam: HNF-1B_C HNF-1_N Homeodomain Homeobox_KN RTX APP1_cat
Other DBs
NCBI-GeneID: 113532922
NCBI-ProteinID: XP_026780454
Position
Unknown
AA seq 572 aa
MFADMVSKLTSLQQELLSALLDSGVTKDVLIQALDDMEPSPASYGVKLENLHMSPPPPPK
TNGSDVEAKPVFHTLTNGHSKGKLSGDEGSEDGDDYDTPPILKELQSLNTEEAAEQRAEV
DRMLAEDPWRAARMIKAYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYT
WYVRKQREILRQFNQATQGSGSSMADKSSQDQVLLLFPEFSQPGPGIGQPGDDAGTEPAL
KKLRRNRFKWGPASQQILYQAYERQKNPSKEEREALVEECNRAECLQRGVSPSKAQGLGT
NLVTEVRVYNWFANRRKEEAFRQKLAMDAYGGQSINPLLTHSSPHHSQASTSPPSKMQAV
RYNQAPSEVSSSSTINHHSMTSSQSVLQQVSPGALDPSHGLLSPDAKMISVSGGGLPPVS
TLTNIHNSHHAHQQTQNLIMPISGVMAIAQGLSTSQAQTVPVINSVAGSLATLQPVQFSQ
QLHSSHQQSLMQQSHSHMSQQPFMATVTHSHMYPHKQEPPQYSHPSRFPSAMVVTDNNSL
STLSSMSSTKQDAPVNKMVQLGGLNWCPLQAW
NT seq 1719 nt   +upstreamnt  +downstreamnt
atgttcgcagacatggtgtccaagctgacatctctgcagcaggagcttttaagcgccctg
ttagactccggagttactaaagatgttttgatccaggcgctggacgacatggagccgagc
ccggccagttacggagttaaactggagaacctgcacatgtctccgccgccgccgcctaaa
actaacggcagcgacgtggaggccaagccggtctttcatacgctgaccaacgggcacagt
aaagggaagctgtcgggggacgagggctcggaggacggagatgattacgacacgccgcct
atcctgaaggagctgcagtctctcaacacggaggaagcggccgagcagcgcgcagaggtg
gaccgcatgctggctgaggacccgtggcgtgccgcgcgcatgatcaaggcctacatgcag
caacacaacattccgcagcgcgaggtggtcgacgtcactggcctcaaccaatcacatctc
tctcagcacctgaacaagggcacgcccatgaagacgcagaagcgcgcggctctttacacc
tggtacgtcaggaagcagcgcgagattctgcgacaattcaaccaagcaacacaagggtct
ggcagtagtatggcagacaaaagcagtcaggatcaggtgctccttcttttcccagagttc
agtcagcctggaccgggcattgggcagcctggagatgatgctggcactgaacctgccctc
aagaaactcagacgcaaccgcttcaagtgggggcctgcgtcccagcagatcctctaccag
gcctatgaacggcagaagaacccaagcaaagaagagcgggaggctctggtagaagaatgc
aatcgggcagagtgtctacagagaggcgtatcaccatctaaagcccaagggcttggtacc
aatttagtcacagaggtgcgcgtttacaactggttcgccaatcggcgcaaagaggaagcc
ttcaggcagaagctggctatggatgcctatggagggcaaagcatcaaccctctcctcaca
cacagctcgccacaccattctcaggccagcacctctccacccagcaagatgcaagctgtc
aggtacaaccaggctcccagtgaagtcagctcctctagcactatcaatcaccacagcatg
acgagcagccagtctgtactgcagcaggtctcccccggtgcactggaccccagccacggc
ctgctgtcacctgacgccaagatgatctcagtatcaggtggaggtcttccaccagttagc
accttgaccaacatccacaactcccaccatgctcaccagcaaacacagaacctcattatg
cccatttctggagtcatggccattgcacagggtctgagcacatcgcaggcacagactgtg
ccagtaatcaacagtgtggcaggaagcctggccaccctacagcccgtgcagttctcacag
cagctgcatagctctcaccagcagagtctcatgcaacagtcccatagccacatgagccaa
cagcccttcatggccaccgttacacactcacatatgtatccacacaagcaggagccacca
cagtattcccacccatcacgctttccgtccgccatggtagtgacagacaacaacagcctc
agcaccctcagctcaatgtcctccaccaaacaggatgctcctgtaaacaagatggtgcaa
ctggggggtctcaactggtgtcctctgcaagcctggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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