KEGG   Pangasianodon hypophthalmus (striped catfish): 113535054
Entry
113535054         CDS       T05759                                 
Name
(RefSeq) nuclear receptor ROR-beta-like isoform X1
  KO
K08533  RAR-related orphan receptor beta
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:phyp03000]
    113535054
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:phyp03310]
    113535054
Transcription factors [BR:phyp03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    113535054
Nuclear receptors [BR:phyp03310]
 1. Thyroid hormone like
  1F. RAR-related orphan receptor
   113535054
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 113535054
NCBI-ProteinID: XP_026783947
Position
Unknown
AA seq 462 aa
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCVIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQGQECVSSVMSSGGVGEES
GENSHDGHTRTCSRSSSTALSDLDDLGGLLFDLPLTPEDEYCGLELQGNNRTSGEGSSGG
SNSSSHSSMELKHECQLLHTHSPLNEGFSLLETERIAQSVVKSHVETSQYSTEELKQLAW
NLYTAEETRTYQNKPMEVMWQQCVVHLTNAIQYVVEFAKRISGFMELCQNDQIILLKAGC
LSVLLIQMCRAYNPANHTLLFDGKFASVQLFKALGCDDLVNAVFELAKSMSRLQLTEEEM
ALFSAAVLFSPDRTWLTDRQQVQRLQGKVYQALQRCLNREGANEHKLDKMLAKLPAIKSI
CSLHIDKLEFFRLLHPETAYSFPPLYREVFGSESFFPDSTKG
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgagagctcaaatcgaggtgatcccctgtaagatctgtggggacaaatcatcagggatc
cattatggagtgatcacatgtgaaggatgtaagggttttttccggcgcagtcagcagaat
aacgccatgtactcgtgttctcggcagaggaactgtgtgatcgaccggacgaacaggaac
cggtgtcagcactgccggctgcagaaatgcctggcgctcggcatgagccgcgacgcggtg
aaatttggccgcatgtctaaaaagcagcgggacagcctgtacgccgaggtgcagaaacat
cagcagggtcaggagtgcgtcagcagcgtcatgtcctccggcggagtgggggaggaatcc
ggagagaacagccacgatggacacactcgaacctgcagccgcagctccagcacagccctc
agcgacctcgacgacctcggaggcctgctgtttgacctgcccctgaccccggaggatgag
tactgcggcctggagctgcagggcaacaacaggacgagcggagaagggagcagcggaggg
agcaactcatcctcacacagctccatggagttaaaacacgaatgccagcttcttcatacg
cactcgccgctcaacgaggggttctcgctgctcgagacagaacgcatcgctcagagtgtg
gtgaagtcacatgtagagacgagtcagtacagcacagaggaactgaaacagcttgcgtgg
aacctgtacacagccgaggagactcgcacttaccagaacaaaccgatggaggtgatgtgg
cagcagtgtgtggtgcacctcactaacgccatccagtacgtggtggagttcgccaagcgc
atctccggcttcatggagctgtgtcagaacgaccagatcatcctgctcaaagcaggatgt
ctgagcgtgttgctgattcagatgtgtcgagcctacaaccccgcgaaccacacgctgctc
ttcgacgggaagttcgcgagcgttcagctcttcaaagctctcggttgtgatgacctggtg
aacgctgtgtttgaactcgctaaatcgatgagccgcctgcagctcacggaagaagaaatg
gctctgttcagcgccgccgtccttttctccccagatcggacctggcttacagacagacag
caggttcagaggctgcaggggaaagtttatcaggcgctgcagcgctgcctgaacagagag
ggcgccaacgagcacaaactcgacaagatgctggctaagcttcctgcgataaagtccatc
tgcagcctccacatcgacaagctggagtttttccgcctgctccacccggaaacagcctac
agcttcccgccgctgtatcgggaggtgttcggtagcgagagcttcttccctgactccacc
aagggctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system