KEGG   Pangasianodon hypophthalmus (striped catfish): 113536476
Entry
113536476         CDS       T05759                                 
Name
(RefSeq) CLIP-associating protein 1-A-like isoform X1
  KO
K16578  CLIP-associating protein 1/2
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:phyp03036]
    113536476
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:phyp04812]
    113536476
Chromosome and associated proteins [BR:phyp03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Microtubule-associated proteins
     113536476
Cytoskeleton proteins [BR:phyp04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Cytoplasmic linker proteins (CLIPs)
     CLIP-associating proteins
      113536476
SSDB
Motif
Pfam: CLASP_N CEP104-like_TOG XMAP215_CLASP_TOG HEAT HEAT_EZ Sec7-like_HUS Cnd1 MMS19_C Dopey_N ParcG TAN
Other DBs
NCBI-GeneID: 113536476
NCBI-ProteinID: XP_026786193
Position
Unknown
AA seq 1571 aa
MEANMEYIVGQVMQKDLGRRLQVGQEIIDYILDRQKSHDLEQDQTMLDRMVDGLATSWVN
SSNFKVALLGMDIVSALVTRLQNRFKPQIGTVLPSLTDRLGDAKDQVRDQAQALLLKIMD
QAANPQYVWDRMLGGFKHKNNRTREAVCFCLISTLNIYGAQGLTLSKIVPHICSLLGDPT
SQVRDGAMNCLVEIYRHVGERVRMDLGKKGLPQSRLNVIFSKFDEVQRSGNMVLSADKNI
DDDDSVDGGRSSASSKGAASVRRTGSTRRPSSASSTKSTGKEVSGAGAVDEEDFIRAFED
VPTVQIYSSRELEESMNKIREVLSDEKQDWEHRVAALKKVRSLLLAGATDHEAFLQQLRQ
LEGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAESIMPTLLNLVPNSAKVMATS
GVAAIRLIIRHTHYPRLIPIITSNCTSKSVAVRRRCYEFLDLLLQEWQTSCLDRHVPVLM
ETIKKGVHDADSEARSVARKCYWGFHGHFSKEAEQLFQALELTYQKALQLHLKSSDSIMS
LPQSDRSSSSSQESLNRPQSAKAPVGSSVTRNKVVSSRVSSTPGSLQRSRSDVDVNAAAT
AKSRMPKVPAAAPFSSAGALPPGSYASLDATPGNVEGRVRTRRQSSGSSVGGGASVTDSR
GRSRAKVVSQSQRSRSANQAGGKTHAGSRSSSPGKLIGQSHGKMSSVTPAEKRTRIPRSQ
GCSRESSPGRSGQARGSRIPRPSMSQGCSRDTSRESSRDTSPARGFTPLVSRRHSRSTSA
LTGGDVLQTDRFGLIHQARISASVNAMRILNTGMEVEAAVADALLLGDSRNKRRPMRRWY
ESAGMYSDDDANSDASSACSELSYSSRNGGVPHYMRQTEDVAEILNHCASSNWSERKEGL
LGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIVLHREDLQDWL
FVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPYDQQFNILMRFIVDQTQTPNLKVKV
AILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKTLHSWVSEELAGRLS
SLTSLPVEGNLEERCKQAAQMVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNS
SNAAATSSPSNTVGRTPPRLSGSRTSPLTSPTNCSHGGLSPSMLEYDTENMNSEEIYSSL
RGVTEAIQSFSFRSQEDSYEPIKRDTKKDDASAVASSAADPRLGTDMMEGGRTALDNKTS
LLNTPSPRSFLGPRTREYNPYNYTDSISTYDKAALKEAVFDDDVEQLRDGRRQEFGENKI
TAPKSYSACPAQHMELVGDLLKELSNHSERVEERRAALLELLKVTRDDSVAVWEEHFKTM
LLLLLETLGDKDHTIRALALRVLKEILRSQPARFRNYAELTIMKTLEAHRDSHKEVVRAA
EEAASTLASSIHPEQCIKVLCPIIQTADYPIDLAAIKMQTKVIERIPEESLYQLLPDIIP
GLLQGYDNTESSVRKASVFCLVAIYSVIGEGLKPHLAQLTGSKMKLLNLYIKRAQTTNSN
SSSSSDISSHS
NT seq 4716 nt   +upstreamnt  +downstreamnt
atggaggccaatatggaatatattgtgggacaggtgatgcagaaagacttgggacggcga
ctccaggtcggacaggagatcatagactacattctggataggcagaagtcacatgacctg
gagcaggatcagaccatgctggacaggatggtggacggcctggctacttcatgggtcaac
tcgagcaacttcaaggtggctcttctgggaatggacattgtgtctgctttagtgaccaga
ttacaaaatcgctttaaaccccaaattggtacagtcctgcccagtttaacagaccgttta
ggtgatgccaaagaccaagtgagagaccaagcccaggctctgctgttaaaaataatggat
caagctgccaatccacagtacgtatgggatcgaatgttgggaggattcaaacacaagaac
aacaggactagagaggctgtctgtttttgccttatttccacactaaatatatatggagcc
cagggtttaactctgagcaagattgttcctcacatatgcagtctgttaggagaccccaca
agtcaggtccgagatggagctatgaactgtcttgtggagatttacagacatgttggagaa
agagtgcgaatggatctcgggaaaaaaggcttgccacaatcacggttgaatgtcattttt
agcaaatttgacgaagtacagcgatcagggaatatggtgctgtctgcagataagaacata
gatgatgacgactctgtggatggaggccgttcctccgcctcctctaaaggagcagcgtct
gtccgccgaacaggatccacgcgcaggccgagctccgcctccagcaccaagagcacagga
aaagaggtgtcaggtgctggtgctgtggatgaggaagacttcatccgtgcctttgaggat
gtgcccaccgtacagatttactccagcagagagctcgaggagtccatgaataaaatcaga
gaggtcctctcagatgaaaaacaagactgggagcacagagtggccgcgctgaagaaggtg
cgttcgctgctgctcgccggggccactgatcatgaagcgttcctccaacaactgcggcag
ctggaaggagcgtttaagctctccgctaaagacctgcgctctcaggttgtccgtgaggcc
tgcatcacgctggggcatctgtcgtctgtgctgggtaacaagtttgaccatggagccgag
tccatcatgcccacgttgctcaatctcgtccccaacagcgctaaagtgatggctacatcc
ggcgtcgcagccatccgccttattatacgacacacacactatcctcggcttatccccatc
attaccagtaactgtacgtccaaatccgtggctgtccggcgacgctgttatgagttttta
gaccttttactccaggagtggcagacgagctgtctggacagacatgtacctgttctgatg
gagaccattaagaaaggagtccacgatgcagactcagaagccagatcggttgccagaaag
tgttattggggattccacggccacttcagtaaggaggcggagcaactgtttcaggctctc
gagctgacctatcagaaggctctgcagttgcatctgaagagctcggacagtattatgtct
ctcccccaatccgatcgctcctcttccagctctcaagagagcctcaatcgtccacagtct
gctaaagcacccgtaggaagcagtgtaaccagaaataaagtggtgagctctagagtgtcc
tctacccctggctcactgcagcgatcacgcagcgatgtcgacgtcaacgccgccgccacc
gccaagtctcgaatgcccaaagtaccagctgctgctccgttcagctcagccggtgcactg
ccgcctggctcctacgcctcgctagatgcaactcctggtaatgtggagggtcgtgtgcgc
acacggagacagagttcaggcagcagcgttggaggcggagcctctgttacagacagtagg
gggcggagccgagcaaaagtggtgtcgcaatcacaacgatccagatcagcaaaccaagca
ggtggtaagactcacgctgggagtcgttccagttctccagggaagcttattggtcagtcc
catggcaaaatgtcctctgtgaccccagcagagaagcgcactaggatcccacgcagtcag
ggctgcagccgagagagcagccccggtcgctctggccaggcgcggggtagtcgcatcccg
cggcccagtatgagtcaggggtgcagtcgtgacacaagcagggagagcagcagagacaca
agtcctgcacggggttttactccccttgtgtctcggcgccactcgcgctccaccagtgcc
ctgacaggcggcgacgtgctgcaaacagatcgttttgggctgatccatcaggcgcggatc
tctgcctcggtcaacgccatgcgcatcctgaacacaggcatggaggtggaggcagctgtc
gctgatgctctgctattaggagactccaggaataagcggaggcccatgcggcgctggtac
gagtctgctggcatgtactcggacgatgacgccaacagcgacgcctccagcgcctgttcg
gagctttcctatagctcgcgtaacggaggagtgccgcactacatgcgtcagacagaggac
gtagccgagatcctaaaccactgcgccagttccaactggtccgagaggaaagaaggcctg
ctgggcctccagaaccttctgaagagccaaagaaccctcagccgtgtggagctcaagagg
ctgtgtgagattttcactaggatgtttgccgaccctcacagcaagagagtgttcagcatg
ttcctggaaacgctggtggacttcatcgtgctgcacagggaggatttgcaggactggctc
tttgtgctcctcacacagctgttaaagaagatgggcgctgatctgctgggctcagtgcag
gccaaagtgcagaaagctctcgatgtcaccagggattcttttccctacgatcagcagttc
aacatcttaatgcgcttcattgtcgatcagacacaaaccccaaacctcaaggtgaaggtg
gccattctgaagtatatcgagtctctggccagacaaatggatcccactgattttgtgaac
tccagtgagacgcgacttgccgtctcccgcatcatcacctggacgacggaacccaagagc
tcagatgtcagaaagaccctgcacagctgggtaagtgaggagctggcaggcaggctcagc
tcactcacctccctccccgtggagggcaacctggaggagagatgtaagcaggctgctcag
atggtgctgatctccctgttcgagctgaacacaccagagttcacaatgctgctgggagcg
ctgcctaaaaccttccaggatggagccaccaaactcctgcataatcacctgaagaactcc
agcaatgctgccgccacgagttcaccaagcaacacagttggccgcacacctccgagactc
tctggttcccgcaccagtcccctgacgtcccctaccaactgctctcatggaggcctctca
cccagcatgctggaatacgacacagagaacatgaactcagaggagatctacagctctctg
agaggagtcactgaagccattcagagcttcagcttccgcagccaggaggacagctacgag
ccaatcaaacgcgacaccaagaaagacgacgcgagtgccgtagcgtcctctgctgcagac
ccccggctaggtacagacatgatggaggggggccgaacggctctggacaacaagacctcg
ttactgaacacaccgtcccctcgctctttcctggggccgaggacgcgcgagtacaatccc
tacaactacaccgactccatcagcacttatgataaagccgctctgaaggaggcagtgttc
gatgatgatgtggaacagctccgtgatggtcgtcgtcaagagtttggtgaaaacaaaatc
acggctcccaaaagttattctgcatgccctgcgcagcacatggagctggttggtgacctc
ctgaaggagctgtccaatcacagcgagcgtgtggaggagaggcgggccgccctgttggag
ctgttgaaggtgacccgcgatgacagcgtagccgtatgggaggagcattttaaaaccatg
ctgctgctgctccttgagacactgggggacaaagatcacaccatccgggcactggctttg
cgtgttctgaaagagatcctgcgaagtcaacctgcacgcttcaggaactatgcagaactg
accattatgaaaacactggaggcacacagagactcccacaaagaggtggtgcgtgctgca
gaggaggccgcctccaccctggcttcctccatccacccggagcagtgcattaaggtgctg
tgtcccatcatacagactgcagactaccccatcgacctggccgccattaaaatgcagacc
aaagtcatcgagcgcattccagaggagtccctttatcagctgctgcctgatatcatcccc
ggcctgctacagggatacgataacactgagagcagcgtgcggaaagccagtgtcttctgc
cttgtggcaatttattctgtgattggagaagggttgaagcctcatcttgcccaactgacg
ggcagcaagatgaaactgctgaacctctacatcaagcgagcccaaactaccaacagcaac
agcagcagctcctctgacatctcctcccacagctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (29)   
   RefSeq(pep) (29)   
DNA sequence (29)   
   RefSeq(nuc) (29)   
Protein domain (11)   
   Pfam (11)   
All databases (76)   

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