KEGG   Pangasianodon hypophthalmus (striped catfish): 113536599
Entry
113536599         CDS       T05759                                 
Symbol
rubcn
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
  KO
K19330  run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    113536599 (rubcn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:phyp04131]
    113536599 (rubcn)
Membrane trafficking [BR:phyp04131]
 Autophagy
  Other autophagy associated proteins
   Others
    113536599 (rubcn)
SSDB
Motif
Pfam: RH_dom RUBC_PIKBD RUN
Other DBs
NCBI-GeneID: 113536599
NCBI-ProteinID: XP_026786443
Position
Unknown
AA seq 899 aa
MEICSEADSVEKRREHWKLLSNLKTTVEGLLSTNNPNVWSRYGGLQRLHKDMTNILSHGL
KHEQVYYKQKDYWRFVWCLRSISPSLAPHVEQFSQMEPVLSSSVQCESDKAERWLLHSLQ
SHTLSIQLKPLITHHNTTRKYYTDEAFLLSELHVAAMFQCLEAVEQNDARLLALINTTRL
SYLKECVPVDLLTSPQCVLPGVSIRTHAPSCSFRDNTHTSYTERSTDAAVCVSASGAPWA
CLSTDQSILEPLITQNSQTDSTHPVNPAPSEGGDCDGDDGPEYLAIGNLGRRSRRGSGSS
AQSTEHSQIRAHIPEAPPPSQRRSSFSDMERGKRRSFRGHARSLSDTGVMQKHKQGGNQR
KITIIIEDPAEESAVDEQCVSSFGPFSPHSSDSSHSSLYMEAGGLQYGSGSDGLFRKPSE
GQSLISYLSEQDFGSCADLEKENAHFSISESLIAAIELMKCKMRAEEADEDGDSDSEIQQ
LKQKIRLRRQQIRRNRLQTPSSTHQTLPSTDSGGSLRSSRDSLLHSDSGSADDVEDPVLR
DADVKQNVNLSSRSFISSDSVSQWLLQSNSAESVAMGLLRQFEGLQLPAASELEWLVPEH
DAPQKLLPMPDSVPISPDDGEHADVYKLRIRVRGNLEWAPPRPQIIFNIHHAPKRKVLVM
KQNYRCAGCGTRIDPDYIKRLRYCEYLGRYFCQCCHENAVAVVPGRVLCKWDFSKYYVSN
FARDLLRKIAQDPLFNLNDINSGLYKKVKNLEAVRVLRLQLFHMKNLFKTCRLAKEVLQH
FDSVPAHLTEDLHLFSLNDLTAVRAGDLAPKLRDLVRVGSEHVASCVLCQAKGFVCEFCG
NDKDIIFPFELNKCRRCEECSACYHRSCFKNKSVCPRCRRLAERRERMNSTNTEEEEGQ
NT seq 2700 nt   +upstreamnt  +downstreamnt
atggagatctgctcagaggcggacagtgtggagaaaagacgtgaacactggaagctcctg
tccaacctgaagacaaccgtcgaaggacttctgtctacaaataacccaaatgtctggtct
cgctatggaggattgcagcgacttcacaaagacatgaccaacatcctgagtcatggcctc
aaacacgaacaggtgtactataagcagaaggattactggcgctttgtgtggtgtctgcgg
tccatcagtcccagtcttgctcctcatgtagaacagttcagtcagatggagccggtgtta
agcagcagtgttcagtgtgagagtgataaggctgagcgttggctcctccacagcctgcag
agtcacacactctccatacaactaaaacccctgatcacacaccacaacaccacccgcaag
tactatacagacgaggcgtttcttctgagtgagctgcatgtggcagccatgtttcagtgt
ttggaggcggtggagcagaacgacgcacggctgcttgccctcatcaacaccacccgcctg
tcctatttgaaggagtgtgttcctgtggatctgctcacctctccgcagtgtgtgctgcct
ggagtttccatacgcacacacgcgccgtcctgctcattcagagacaacacacacacttca
tacaccgagaggagtacagatgcagcagtgtgtgtaagcgcctcgggggccccgtgggcg
tgtttgagcactgaccaaagcatcttggaaccactgataacccagaattctcagaccgac
tccacccatcctgttaaccctgccccctctgagggtggagactgtgatggtgatgatggg
ccagagtatctcgccatcgggaacctggggaggcggagccgcagaggttctggcagctca
gcacaaagcaccgagcactctcagatcagggcccacatacctgaagctccgcccccttcc
caaagacgcagctccttctctgatatggaaaggggaaagagacgaagcttcaggggtcac
gcaaggtccctgtctgatacaggggtcatgcagaaacacaaacaaggagggaaccagagg
aaaatcaccattataatagaggatcccgctgaagagtcagctgtagatgagcagtgtgtg
agtagtttcgggcctttctcccctcacagcagtgacagcagtcacagttctctctacatg
gaggccggaggacttcagtatggtagcgggtctgatggattgttccggaagccgtcagaa
ggtcagagtctgatcagctacttgtcagagcaggactttggcagctgtgcagatctggag
aaggagaatgcacacttcagcatctccgaatctctgattgccgccatcgagctaatgaaa
tgtaagatgagggcggaggaggcagatgaggatggagacagcgacagtgagatccagcag
ctcaaacagaagatccgtctgcgcagacagcagatccgccgcaaccgcctgcaaactccc
agctctacccaccaaactcttccctccacagacagtggtggatcactgcggagctccagg
gattccctgctccactctgactctggatcagctgatgatgtggaggaccctgtgctgaga
gatgcagatgttaaacagaatgtaaatctgagcagcaggtccttcatcagctctgattct
gtgtctcagtggttgttgcagtcgaatagtgctgaatcagttgcaatggggctgctgcgt
cagtttgagggtttgcagcttcccgctgcctctgaacttgagtggcttgtccctgaacat
gatgctcctcagaagctgctgccgatgcctgactcggtgccgatctctccggatgatggt
gaacacgctgacgtgtataaactgcgaatccgtgtgagggggaatctcgagtgggcaccc
ccgagacctcagatcatcttcaacatccatcatgcccccaagaggaaggtgttggtgatg
aagcagaattacaggtgtgcaggatgtggaactcgtattgacccagattacattaagagg
ctgcgttactgcgagtacctaggccggtatttctgtcagtgttgccatgaaaacgcggtt
gccgtggtgccagggcgcgtcctgtgtaaatgggatttcagtaaatattacgtcagtaac
tttgcccgagacctgttgcgaaaaattgcccaggatcctttgttcaacctcaacgacatc
aacagcggcttgtacaagaaggtgaagaacctggaggccgtgcgggtcttgaggctgcag
ctgttccacatgaagaacctctttaaaacctgccgtctagccaaagaagtcctgcagcac
tttgactcagttcctgcacacttgactgaggatctccacctgttttctctgaatgacctg
acagccgtgcgtgccggtgacctcgcacccaagctgcgtgaccttgtgcgggtggggtca
gagcatgtcgcttcctgtgtgctgtgtcaggcaaagggattcgtttgtgagttctgtggg
aatgataaggacatcatcttcccctttgagctgaacaagtgtcgccgctgtgaggaatgc
agtgcgtgttatcaccgctcgtgctttaagaacaagagtgtgtgtccgcggtgtcgccgc
ctggctgagagacgagagaggatgaacagcacaaacacagaggaggaggaggggcaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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